Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_I22
         (767 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0485 - 8808139-8808618                                           33   0.25 
03_02_0484 + 8805053-8805538                                           33   0.25 
03_02_0483 - 8804021-8804485                                           33   0.25 
11_06_0344 + 22540436-22540737,22541304-22543545                       28   9.4  

>03_02_0485 - 8808139-8808618
          Length = 159

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -2

Query: 766 REFLLPKGTNPEAIKSSLSRDGVLTVEAP 680
           R F LP+ T PE IK+S+  +GVLTV  P
Sbjct: 116 RRFRLPENTKPEQIKASM-ENGVLTVTVP 143


>03_02_0484 + 8805053-8805538
          Length = 161

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -2

Query: 766 REFLLPKGTNPEAIKSSLSRDGVLTVEAP 680
           R F LP+ T PE IK+S+  +GVLTV  P
Sbjct: 118 RRFRLPENTKPEQIKASM-ENGVLTVTVP 145


>03_02_0483 - 8804021-8804485
          Length = 154

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -2

Query: 766 REFLLPKGTNPEAIKSSLSRDGVLTVEAP 680
           R F LP+ T PE IK+S+  +GVLTV  P
Sbjct: 111 RRFRLPENTKPEQIKASM-ENGVLTVTVP 138


>11_06_0344 + 22540436-22540737,22541304-22543545
          Length = 847

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 8/71 (11%)
 Frame = -3

Query: 750 PRXQILRPLSLRCPGTACLPWKRP----CHNSPSRTG----TFLSRSTERSHHSPRVH*G 595
           PR   L    + C G    PW  P        P R          RS + S HSPRV   
Sbjct: 40  PRSPWLPSEPVNCSGGLGRPWMTPEPLGGSEGPGRLWRPWLALKPRSVDSSGHSPRVDGS 99

Query: 594 SRYSITVNNLF 562
            RY I +++++
Sbjct: 100 GRYLIVIDDMW 110


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,286,713
Number of Sequences: 37544
Number of extensions: 304356
Number of successful extensions: 598
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)