Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_I14
(692 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0366 + 16970063-16970254,16970697-16970720,16972440-16973591 116 2e-26
10_08_0422 - 17796916-17797167,17797328-17797453,17797546-177977... 100 1e-21
01_06_1496 + 37772838-37772935,37773039-37773243,37773649-377737... 82 5e-16
02_02_0576 + 11730171-11730466,11733096-11733435,11733530-117337... 44 1e-04
02_02_0578 + 11745811-11746013,11749902-11750241,11750325-117505... 42 6e-04
11_06_0535 - 24740950-24741089,24741358-24741451,24741535-247416... 41 8e-04
02_02_0597 - 11996350-11996483,11997511-11997604,11997877-119980... 38 0.008
11_06_0060 - 19695338-19695477,19695641-19695734,19695818-196959... 37 0.017
06_02_0276 + 13678457-13678734,13679592-13679931,13680025-136802... 37 0.017
11_05_0028 - 18468407-18468859,18469070-18469228,18469361-18470227 31 1.1
08_02_1000 + 23433447-23433946,23434078-23434279 30 1.5
03_02_0010 + 4903473-4903525,4904117-4904175,4904285-4904355,490... 30 2.0
06_02_0080 + 11518393-11518398,11520318-11520401,11520846-115209... 29 4.6
04_04_1032 - 30259180-30260519,30260650-30260720,30261099-302621... 28 6.1
01_07_0383 - 43195095-43195322,43195408-43195638,43196134-431964... 28 6.1
01_06_0192 + 27347369-27348826,27349124-27349264,27349350-273510... 28 8.1
>09_04_0366 + 16970063-16970254,16970697-16970720,16972440-16973591
Length = 455
Score = 116 bits (278), Expect = 2e-26
Identities = 72/194 (37%), Positives = 100/194 (51%), Gaps = 1/194 (0%)
Frame = -3
Query: 690 VLCLSDEVYEWMVYEPKQHIRIASFPGMWERTITVGSAGKTFSVTGWKIGWAYGPADLMR 511
VL +DEVY+ + +E HI +AS PGM+ERT+T+ S GKTFS+TGWKIGWA P L
Sbjct: 262 VLLFADEVYDKLAFEA-DHISMASIPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW 320
Query: 510 NLQVVHQNCVYTCCTPVEEAVARSFEYELARRDSPECYFYSLARELRPKRDYLMKILKEN 331
++ H + CTP++ A A + +P+ Y+ L R+ K+ L+ LK+
Sbjct: 321 GVRQAHSFLTFATCTPMQAAAAAALR-------APDSYYEELRRDYGAKKALLVNGLKDA 373
Query: 330 GFKPTLPEAG-YFVVADWTDLEKKIDLSSELXXXXXXXXXXXXXKEAGVLAIPPSAFYSE 154
GF P +G YFV+ D T D+ +E GV+AIPPS FY
Sbjct: 374 GF-IVYPSSGTYFVMVDHTPFGFDNDIE----------FCEYLIREVGVVAIPPSVFYLN 422
Query: 153 AHKHLGETFARFCF 112
G+ RF F
Sbjct: 423 PED--GKNLVRFTF 434
>10_08_0422 -
17796916-17797167,17797328-17797453,17797546-17797700,
17797793-17797907,17798022-17798118,17798274-17798368,
17798500-17798585,17798689-17798819,17798909-17799090
Length = 412
Score = 100 bits (239), Expect = 1e-21
Identities = 48/134 (35%), Positives = 79/134 (58%), Gaps = 1/134 (0%)
Frame = -3
Query: 681 LSDEVYEWMVYEPKQHIRIASFPGMWERTITVGSAGKTFSVTGWKIGWAYGPADLMRNLQ 502
++DEVYE++ Y+ +HI +AS PGM ERTI S KT+SVTGW+IGWA PA++ ++
Sbjct: 194 ITDEVYEYITYDENKHISLASLPGMQERTIITSSLSKTYSVTGWRIGWACAPANIASAIR 253
Query: 501 VVHQNCVYTCCTPVEEAVARSFEYELARRDSPECYFYSLARELRPKRDYLMKILKENGFK 322
+H + P +EA L SP ++ SL ++ +RD+++++L + GF+
Sbjct: 254 NIHVKLTDSAPAPFQEAA-------LVALTSPPDFYSSLKQDYTARRDFILQVLTDFGFR 306
Query: 321 PTL-PEAGYFVVAD 283
+ P+ FV +
Sbjct: 307 ISFKPQGSIFVFVE 320
>01_06_1496 +
37772838-37772935,37773039-37773243,37773649-37773742,
37773830-37773933,37774370-37774618,37774706-37774819,
37775010-37775093,37775292-37775462,37775544-37775657,
37775751-37775894
Length = 458
Score = 81.8 bits (193), Expect = 5e-16
Identities = 40/139 (28%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Frame = -3
Query: 690 VLCLSDEVYEWMVYEPKQHIRIASFPGMWERTITVGSAGKTFSVTGWKIGWAYGPADLMR 511
+L LSDE+YE ++Y+P +H AS PGMW+RT+TV K F++TGW++G+ P +
Sbjct: 249 LLVLSDEIYEHIIYQPAKHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYLAAPKHFVA 308
Query: 510 NLQVVHQNCVYTCCTPVEEAVARSFEYELARRDSPECYFYSLARELRPKRDYLMKILKE- 334
+ + ++A + A ++ ++ + + +RDYL+K KE
Sbjct: 309 ACGKIQSQFTSGASSISQKAGLAALNLGYAGGEAVS----TMVKAFQERRDYLVKSFKEL 364
Query: 333 NGFKPTLPEAGYFVVADWT 277
G K + P+ +++ D++
Sbjct: 365 PGVKISEPQGAFYLFIDFS 383
>02_02_0576 +
11730171-11730466,11733096-11733435,11733530-11733748,
11734687-11734746,11734847-11735096,11735314-11735441
Length = 430
Score = 44.0 bits (99), Expect = 1e-04
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Frame = -3
Query: 690 VLCLSDEVYEWMVYEPKQHIRIASFPGMWERTITVGSAGKTFSVTGWKIGW--AYGPADL 517
++ +SDEVY+ + K + + F G +T+G K + V GW++GW A P +
Sbjct: 222 IMVISDEVYDHFAFGSKPFVPMGVF-GDVAPVMTLGGISKRWMVPGWRLGWIAATDPNGI 280
Query: 516 MRNLQVVHQNCVYTCCT--PVEEAVARSFEYELARRDSPECYFYSLARELRPKRDYLMKI 343
+RN +++ Y + PV V + LA+ D + +F + ++ + +
Sbjct: 281 LRNKKIIDSVIDYRAISVDPV-TFVQGALPDILAKTD--DAFFTNALGVVKKAAEICYEK 337
Query: 342 LKENG--FKPTLPEAGYFVVADWTDLEKKIDLSS 247
LKE P PE FV+A K+DLSS
Sbjct: 338 LKEIDCITCPHKPEGSMFVMA-------KLDLSS 364
>02_02_0578 +
11745811-11746013,11749902-11750241,11750325-11750543,
11751043-11751102,11751262-11751417,11751518-11751611,
11751914-11751927
Length = 361
Score = 41.5 bits (93), Expect = 6e-04
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Frame = -3
Query: 690 VLCLSDEVYEWMVYEPKQHIRIASFPGMWERTITVGSAGKTFSVTGWKIGW--AYGPADL 517
+L ++DEVY+ + + I I F G IT+GS K + V GW++GW P +
Sbjct: 191 LLIIADEVYDHLAFGNNPFIPIGVF-GKTVPVITLGSISKRWLVPGWRLGWIATCDPNGI 249
Query: 516 MRNLQVVHQNCVYTCCTPVEEAVARSFEYELARRDSPECYFYSLARELRPKRDYLMKILK 337
++ + V+Q+ + A ++ E YF + +LR D +K
Sbjct: 250 LKEAK-VNQSIENYINISTDPATFVQGAIPQIIANTKEDYFNKILDQLRNAADLCYDKIK 308
Query: 336 E-NGFK-PTLPEAGYFVV 289
+ G P PE FV+
Sbjct: 309 DIKGITCPHKPEGSMFVM 326
>11_06_0535 -
24740950-24741089,24741358-24741451,24741535-24741690,
24741782-24741841,24741930-24742142,24742423-24742492,
24746129-24746463,24747616-24747647,24747749-24747776
Length = 375
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = -3
Query: 681 LSDEVYEWMVYEPKQHIRIASFPGMWERTITVGSAGKTFSVTGWKIGW 538
++DEVY MV+ + + +A+F + IT+G+ K F + GW++GW
Sbjct: 168 IADEVYAHMVFGGSKFVPMATFAHITP-VITIGALSKKFMLPGWRLGW 214
>02_02_0597 -
11996350-11996483,11997511-11997604,11997877-11998032,
11998580-11998639,11998733-11998951,11999038-11999377,
12001240-12001571
Length = 444
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = -3
Query: 690 VLCLSDEVYEWMVYEPKQHIRIASFPGMWERTITVGSAGKTFSVTGWKIGW 538
+L ++DEVY +V+ + + F G +T+GS K + V GW++GW
Sbjct: 234 ILVITDEVYGNLVFGSSPFVPMGCF-GHIVPILTIGSLSKRWIVPGWRLGW 283
>11_06_0060 -
19695338-19695477,19695641-19695734,19695818-19695973,
19696109-19696168,19696384-19696602,19696607-19697036,
19698428-19698747
Length = 472
Score = 36.7 bits (81), Expect = 0.017
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 690 VLCLSDEVYEWMVYEPKQHIRIASFPGMWERTITVGSAGKTFSVTGWKIGW 538
+ ++DEVY + + + + + F G +T+GS K + V GW++GW
Sbjct: 260 IFVIADEVYAHLTFGQNKFVPMGVF-GSVAPVLTLGSISKRWVVPGWRLGW 309
>06_02_0276 +
13678457-13678734,13679592-13679931,13680025-13680243,
13680328-13680420
Length = 309
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 690 VLCLSDEVYEWMVYEPKQHIRIASFPGMWERTITVGSAGKTFSVTGWKIGW 538
+L ++DEVY +VY + + F G +T+G+ K + V GW+ GW
Sbjct: 216 LLVIADEVYGHLVYGSTPFVPMGVF-GETVPVLTLGAISKRWVVPGWRFGW 265
>11_05_0028 - 18468407-18468859,18469070-18469228,18469361-18470227
Length = 492
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 581 DPTVMVLSHMPGKDAIRICCLGSYTIHS 664
D +M+LSH+P +DA R C+ +HS
Sbjct: 5 DLLLMILSHVPMRDAARAACVSHAFLHS 32
>08_02_1000 + 23433447-23433946,23434078-23434279
Length = 233
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/65 (35%), Positives = 26/65 (40%)
Frame = -2
Query: 523 RPDEESASCAPELCVHVLHASRGSRGPLVRVRAGQARLAGVLLLFSGSRAAPEARLPHED 344
R D+E A AP L L GSR G +AG L SGS A A P +
Sbjct: 4 RADDEKAVLAPTLSCADLVRGDGSRAAGGGDARGGGGMAGSGTLLSGSGAGGRAPTPGSE 63
Query: 343 TEGER 329
G R
Sbjct: 64 AAGAR 68
>03_02_0010 +
4903473-4903525,4904117-4904175,4904285-4904355,
4904469-4904585,4907001-4907024,4907055-4907117,
4907303-4907407,4907552-4907602,4907702-4908535
Length = 458
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 627 IASFPGMWERTITVGSAGKTFSVTGWKIGWAYGPADLM 514
I PG E I V S K TG ++GWA P +L+
Sbjct: 283 IYEIPGAREVAIEVSSFSKFAGFTGVRLGWAVVPDELL 320
>06_02_0080 +
11518393-11518398,11520318-11520401,11520846-11520974,
11521362-11521450,11521589-11521772,11522414-11522504,
11522816-11522970,11523190-11523282,11523473-11523565,
11523715-11523795,11523867-11524016,11524134-11524229,
11524489-11524566
Length = 442
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 664 RVDGVRAQTAYPDSVLPGHVGEDHHRRVRGEDVLRHRVEDRVGVRTSRPDEES 506
++ G R P++VL +VG H + E +LRH + + R E+S
Sbjct: 30 KIPGFRPGKVVPENVLINYVGPKHVQDATVEAILRHTLPQALSSVEDRALEDS 82
>04_04_1032 -
30259180-30260519,30260650-30260720,30261099-30262118,
30263886-30264121
Length = 888
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 399 STPASRAWPARTRTSGPRLPRLACSTCTHSSG 494
ST AS AW RT+ PR+PR + T G
Sbjct: 722 STSASPAWRTGRRTAMPRIPRSNSTRVTLDDG 753
>01_07_0383 - 43195095-43195322,43195408-43195638,43196134-43196454,
43196512-43196589,43196664-43197727,43197813-43198503,
43198743-43199541,43200010-43200158,43200159-43200286,
43200389-43200494,43200835-43200843,43201332-43201821,
43201896-43202554,43203759-43203851,43204044-43204196,
43205092-43205194,43205376-43205467,43206229-43206306,
43206987-43207049,43207339-43207512
Length = 1902
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 438 TSGPRLPRLACSTCTH 485
TS LPRLAC TC H
Sbjct: 1861 TSNHSLPRLACKTCRH 1876
>01_06_0192 + 27347369-27348826,27349124-27349264,27349350-27351081,
27353739-27354606,27354784-27355957
Length = 1790
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -3
Query: 567 FSVTGWKIGWAYGPA--DLMRNLQVVHQNCVYTCCTPVEEAV 448
F V K+G P D M++L V+ C+Y CC AV
Sbjct: 1607 FPVDDVKLGHLVNPQSQDTMKSLSVLKPPCLYKCCPVCFNAV 1648
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,613,294
Number of Sequences: 37544
Number of extensions: 348231
Number of successful extensions: 1388
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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