Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_I08
         (749 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81516-3|CAB04204.1|  370|Caenorhabditis elegans Hypothetical pr...   204   7e-53
Z81078-5|CAB03078.2|  722|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z75535-4|CAA99828.2|  722|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U10438-8|AAU87835.1|  627|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z66499-5|CAE17941.1|  143|Caenorhabditis elegans Hypothetical pr...    28   6.2  
L15314-7|AAF99989.1|  346|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z81516-3|CAB04204.1|  370|Caenorhabditis elegans Hypothetical
           protein F26H9.5 protein.
          Length = 370

 Score =  204 bits (497), Expect = 7e-53
 Identities = 98/213 (46%), Positives = 139/213 (65%), Gaps = 2/213 (0%)
 Frame = -1

Query: 749 IHGVXFD-FIPDTKGVPLIADMSSXIMSKKVDVSKFGVIYAGAQKNIGTSGVALVIVRED 573
           +HG+ F    P++  VPL+AD+SS  M++  D    GV++ GAQKN+G +G+ +VIVR+D
Sbjct: 155 VHGIEFTPTAPESHNVPLVADVSSNFMARPFDFKDHGVVFGGAQKNLGAAGLTIVIVRKD 214

Query: 572 LLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMGRVLQWIQRNGGLEGMSQLATKKA 393
           L+ +     PS+  +      NS+ NTPP   IY    VL+WI+  GGL+ + +L  +K+
Sbjct: 215 LIGKQQAITPSVFSYKEMIANNSLYNTPPTGGIYTTNLVLKWIKSKGGLQAIYELNLQKS 274

Query: 392 SLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIGCP-GDDALEKEFLKGAETLGLIQLKGH 216
            +IY+ I+ SNGFY+  V K  RS MNV FRIG P G+D LE++FLKG+    +I LKGH
Sbjct: 275 GMIYDIIDNSNGFYHCAVDKRYRSIMNVCFRIGGPSGNDELEEKFLKGSIERNMISLKGH 334

Query: 215 RDVGGIRASIYNAVTLEEVQAXVQYMEECXKKH 117
           R VGGIRAS+YNA+++EE Q    +M E  K H
Sbjct: 335 RSVGGIRASLYNAISVEETQVLATWMNEFQKLH 367


>Z81078-5|CAB03078.2|  722|Caenorhabditis elegans Hypothetical
           protein F14B4.1 protein.
          Length = 722

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = -1

Query: 551 TC-PSLLDWTANYKQNSILNTPPMFAIYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNT 375
           TC P       + K    ++  PM+  +  G+ +  I  +G    + +   +K ++I   
Sbjct: 299 TCDPRTYKLATDNKTCERIDQSPMWLFFAHGQSVWNISTDGKSFQLQRAGLQKTAMIDID 358

Query: 374 IEQSNGFYYAPVAKNVRSKMNV 309
           +++ N  YYA +  NV  +MN+
Sbjct: 359 VKE-NRLYYADIGANVIERMNI 379


>Z75535-4|CAA99828.2|  722|Caenorhabditis elegans Hypothetical
           protein F14B4.1 protein.
          Length = 722

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = -1

Query: 551 TC-PSLLDWTANYKQNSILNTPPMFAIYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNT 375
           TC P       + K    ++  PM+  +  G+ +  I  +G    + +   +K ++I   
Sbjct: 299 TCDPRTYKLATDNKTCERIDQSPMWLFFAHGQSVWNISTDGKSFQLQRAGLQKTAMIDID 358

Query: 374 IEQSNGFYYAPVAKNVRSKMNV 309
           +++ N  YYA +  NV  +MN+
Sbjct: 359 VKE-NRLYYADIGANVIERMNI 379


>U10438-8|AAU87835.1|  627|Caenorhabditis elegans Hypothetical
           protein B0280.2 protein.
          Length = 627

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 21/73 (28%), Positives = 27/73 (36%)
 Frame = +2

Query: 50  QQIPNHIQKVSLACLNXTXFPWXVFXSTPPCTERXLEPPLGSLHYILRHEYRQRLCVLLA 229
           Q +   +    L   N   FP     S  P  E  L PP+     +        LC++LA
Sbjct: 366 QNLREEVLPFELEVGNYVSFPNHTHCSEKPIAEAPLRPPVRPAPIV---PTSAGLCLVLA 422

Query: 230 E*VPKSQHPSRIL 268
              P S  PSR L
Sbjct: 423 ASFPTSSTPSRFL 435


>Z66499-5|CAE17941.1|  143|Caenorhabditis elegans Hypothetical
           protein T01B7.9 protein.
          Length = 143

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 543 GTCR*SLIQKILSNNDKRYPRCTNILLSTSIYHPKL 650
           G C   +  K L NN      C N+ +S+S+Y P L
Sbjct: 59  GVCYGDICVKSLVNNHYVSKGCENLTISSSVYEPHL 94


>L15314-7|AAF99989.1|  346|Caenorhabditis elegans Hypothetical
           protein K06H7.8 protein.
          Length = 346

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -3

Query: 744 WCXI*LHTRYERSTFNRRYVLXHYVEES*CFKVWGDI 634
           +C + +H RYE+   +  + L + + E  C   W D+
Sbjct: 196 YCSVAMHDRYEQGRVDDLWALVYILAEMRCRLAWHDV 232


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,882,027
Number of Sequences: 27780
Number of extensions: 353512
Number of successful extensions: 842
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)