Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_I07
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    24   5.2  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   5.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   9.1  

>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -1

Query: 624 SRNYSREYPSSSLP--C-SDVKLSCIGTPARAWTRWSSTKQRA 505
           SR     Y S+++P  C S+  L CIG  AR W   +   +RA
Sbjct: 49  SRQSLYAYDSAAVPLNCGSNCLLRCIGLNARWWHDETGLSERA 91


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 526 EFNEAESNVNDLVSEYQQYQEATAEDDTEF 437
           E  + E+N+N +VSE Q+ +    +    F
Sbjct: 703 ELKQTEANINSIVSEMQKTETKQGKSKDAF 732


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +1

Query: 382 VKSSHGARPAPTPPGLLGRTRCRLPRWPPGTVG 480
           +  ++G    P  PGL GR  C      PG  G
Sbjct: 161 IPGTNGVPGVPGAPGLAGRDGCNGTDGLPGLSG 193


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,495
Number of Sequences: 2352
Number of extensions: 8352
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)