Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_I06
(741 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 73 4e-14
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 69 5e-13
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 67 2e-12
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 64 3e-11
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 56 4e-09
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 29 0.53
SPAC3F10.02c |trk1|sptrk|potassium ion transporter Trk1|Schizosa... 28 1.2
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 27 2.8
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 3.7
SPBC244.02c |||U3 snoRNP-associated protein Utp6 |Schizosaccharo... 26 4.9
SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|c... 26 4.9
SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr 1|... 26 6.5
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 8.6
SPBC646.12c |gap1|src1, sar1|GTPase activating protein Gap1|Schi... 25 8.6
SPAP27G11.09c |||GTP cyclohydrolase |Schizosaccharomyces pombe|c... 25 8.6
SPBC27.02c |ask1|mug181|DASH complex subunit Ask1|Schizosaccharo... 25 8.6
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 72.9 bits (171), Expect = 4e-14
Identities = 49/146 (33%), Positives = 84/146 (57%)
Frame = -2
Query: 683 LRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQTL 504
L+ LD+S N+L L LS L HL++L +DSN L +L + + +L L L+ NN ++ L
Sbjct: 670 LQYLDISYNQLEDLTG-LSSLIHLRELKVDSNHLWSL-DGIQHLDGLLKLSACNNRIKEL 727
Query: 503 PVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSELYVIELNL 324
NL+ L+++ NN+++ ++I LQ+L VL L +NK+T + +++ L +
Sbjct: 728 SFTNSNLHRLEELLLGNNEIEEI-EEISSLQNLMVLQLDNNKLTNLKASQPMIHLRILRI 786
Query: 323 SQNEISLIGEDLHQAPRLKILRLDEN 246
S N I + ++ Q P L+ L +D N
Sbjct: 787 SNNAIHQL--EVDQFPHLRTLYMDLN 810
Score = 40.3 bits (90), Expect = 3e-04
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Frame = -2
Query: 683 LRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESLINLKKLEVLNI--SNNFVQ 510
LR L + N+ + P D+ +LK L + + +A + + L++ N+ SNN
Sbjct: 802 LRTLYMDLNRFN-RPPDIRRLKRLVNFSFRTQDPEA--SNFVIQPSLDIRNLYLSNNTFV 858
Query: 509 TLPVCLKNLNNLKQVYASNNKLQAFPKQIL-GLQSLDVLDLSHNKITEI 366
TL C ++ + +N +L+ PK I + +L VLDLSHN I++I
Sbjct: 859 TLD-CKHMFLGVRYLELANVQLKEVPKYIATSMPNLRVLDLSHNYISDI 906
Score = 39.9 bits (89), Expect = 4e-04
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Frame = -2
Query: 740 IADCKLKEIPIDVFSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSN---KLQALP 570
+A+ +LKE+P + + LR LDLS N +S + + L L+ + +L L N K++ L
Sbjct: 874 LANVQLKEVPKYIATSMPNLRVLDLSHNYISDI-ESLKPLQMIHRLYLVGNRIKKMRNLC 932
Query: 569 ESLINLKKLEVLNISNN 519
+ L NLK+L VL++ N
Sbjct: 933 DILANLKQLNVLDLRMN 949
Score = 31.1 bits (67), Expect = 0.17
Identities = 24/104 (23%), Positives = 47/104 (45%)
Frame = -2
Query: 620 KHLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQ 441
K + QL++ L +L +E L + N + L C + +L V + L
Sbjct: 603 KRIIQLDISRRHLDSLIGLSELCPSIEELTLEGNEIAYLTGCPVTIRDLNAVENRLSSLT 662
Query: 440 AFPKQILGLQSLDVLDLSHNKITEIPYGMSELYVIELNLSQNEI 309
+F L +L LD+S+N++ ++ S +++ EL + N +
Sbjct: 663 SFSN----LLNLQYLDISYNQLEDLTGLSSLIHLRELKVDSNHL 702
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 69.3 bits (162), Expect = 5e-13
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Frame = -2
Query: 740 IADCKLKEIPIDVFS-LCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPES 564
++ L+E+P + + + L L N + + ++ K L+ LN+ SN L+ PES
Sbjct: 34 LSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILKFTRLRYLNIRSNVLREFPES 93
Query: 563 LINLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSH 384
L L+ LE+L+IS N ++ LP L NLK + S N+L P I + +L++L + +
Sbjct: 94 LCRLESLEILDISRNKIKQLPESFGALMNLKVLSISKNRLFELPTYIAHMPNLEILKIEN 153
Query: 383 NKITEIP 363
N I P
Sbjct: 154 NHIVFPP 160
Score = 57.6 bits (133), Expect = 2e-09
Identities = 36/125 (28%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Frame = -2
Query: 674 LDLSKNKLSVLP-DDLSKLK-HLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQTLP 501
LDLS L LP + L +++ + +L L N ++++ ++ +L LNI +N ++ P
Sbjct: 32 LDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILKFTRLRYLNIRSNVLREFP 91
Query: 500 VCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSELYVIE-LNL 324
L L +L+ + S NK++ P+ L +L VL +S N++ E+P ++ + +E L +
Sbjct: 92 ESLCRLESLEILDISRNKIKQLPESFGALMNLKVLSISKNRLFELPTYIAHMPNLEILKI 151
Query: 323 SQNEI 309
N I
Sbjct: 152 ENNHI 156
Score = 56.0 bits (129), Expect = 5e-09
Identities = 33/98 (33%), Positives = 54/98 (55%)
Frame = -2
Query: 683 LRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQTL 504
LR L++ N L P+ L +L+ L+ L++ NK++ LPES L L+VL+IS N + L
Sbjct: 77 LRYLNIRSNVLREFPESLCRLESLEILDISRNKIKQLPESFGALMNLKVLSISKNRLFEL 136
Query: 503 PVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDL 390
P + ++ NL+ + NN + FP + L D+
Sbjct: 137 PTYIAHMPNLEILKIENNHI-VFPPPHIANNDLQDSDM 173
Score = 35.9 bits (79), Expect = 0.006
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = -2
Query: 419 GLQSLDVLDLSHNKITEIPYGMSELY---VIELNLSQNEISLIGEDLHQAPRLKILRLDE 249
G ++ LDLSH + E+PY E + L L N I IG ++ + RL+ L +
Sbjct: 25 GPENALTLDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILKFTRLRYLNIRS 84
Query: 248 NCLSLDEIKPSLLRDSKIHTVSVDGN 171
N L E SL R + + + N
Sbjct: 85 NVLR--EFPESLCRLESLEILDISRN 108
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 67.3 bits (157), Expect = 2e-12
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 5/189 (2%)
Frame = -2
Query: 719 EIPIDVFSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSN---KLQALPESLINLK 549
++P+D C L+ LD+S N S ++ L+ L+ LN+ N +L L S ++
Sbjct: 443 DLPLDFMERCVKLKRLDISNNLRSPRGKPITALRQLEVLNMSRNDIYELDPLIFSGLSRN 502
Query: 548 KLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITE 369
L+ LNI+NN + LP + L NL + S N FP I L L+ L+ SHN +++
Sbjct: 503 SLKELNIANNKLFFLPHSTRYLVNLTYLDLSYNNFVTFPLIITELSQLETLNFSHNLLSQ 562
Query: 368 IPYGMSELYVIE-LNLSQNEIS-LIGEDLHQAPRLKILRLDENCLSLDEIKPSLLRDSKI 195
I + L ++ L L N++S + +++ L+ + L N ++ I SL K+
Sbjct: 563 ISSKIGSLVKLKHLYLQFNDLSNRLPQEIGLLKNLETIDLSYNAIT--NI-ASLSECPKL 619
Query: 194 HTVSVDGNL 168
++++V NL
Sbjct: 620 NSINVACNL 628
Score = 62.5 bits (145), Expect = 6e-11
Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 29/184 (15%)
Frame = -2
Query: 701 FSLCDVLRNLDLSKNKLSVLP-------------------------DDLSKLKHLKQLNL 597
FS + NLD+S++ L V+P D + + LK+L++
Sbjct: 401 FSEKKITANLDISRSNLEVIPVKIYPYAHELISLNVSHNLSLDLPLDFMERCVKLKRLDI 460
Query: 596 DSNKLQALPESLINLKKLEVLNISNNFVQTL-PVCLKNL--NNLKQVYASNNKLQAFPKQ 426
+N + + L++LEVLN+S N + L P+ L N+LK++ +NNKL P
Sbjct: 461 SNNLRSPRGKPITALRQLEVLNMSRNDIYELDPLIFSGLSRNSLKELNIANNKLFFLPHS 520
Query: 425 ILGLQSLDVLDLSHNKITEIPYGMSELYVIE-LNLSQNEISLIGEDLHQAPRLKILRLDE 249
L +L LDLS+N P ++EL +E LN S N +S I + +LK L L
Sbjct: 521 TRYLVNLTYLDLSYNNFVTFPLIITELSQLETLNFSHNLLSQISSKIGSLVKLKHLYLQF 580
Query: 248 NCLS 237
N LS
Sbjct: 581 NDLS 584
Score = 50.0 bits (114), Expect = 3e-07
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Frame = -2
Query: 707 DVFSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESLINLKKLEVLNI 528
D S L+ L + ++S + +L KLKHL L+L +N ++ PE + + L+V+N+
Sbjct: 700 DAISAMQNLKYLSCTNCEMSYVSPNLGKLKHLVHLDLHANNIKIFPEEVWQVSSLKVVNL 759
Query: 527 SNNFVQ--TLPVC-----LKNLNNLKQVYA-SNNKLQAFPKQILGLQSLDVLDLSHNKIT 372
S+N ++ LPV + ++ LK + S N + + Q + +++ L L N++
Sbjct: 760 SSNILEKIKLPVATSKKLTRTISQLKIMRTLSGNPVSSLSSQEFVMPTVEELYLVDNRLG 819
Query: 371 EIPYGMSELY--VIELNLSQNEISLIGEDLHQ 282
+ E + + LNLS N ++ I Q
Sbjct: 820 NDCFTALEYFKCLKVLNLSYNYLTEIPSKFFQ 851
Score = 46.4 bits (105), Expect = 4e-06
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = -2
Query: 632 LSKLKHLKQLNLDSNKLQALPESLI-NLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYAS 456
L K LK LNL N L +P N L+ L +S N + L + L+ +YA+
Sbjct: 826 LEYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELANLSISSTAQVLLETLYAN 885
Query: 455 NNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSE 348
N+L +FPK +SL LD+S N + + +E
Sbjct: 886 GNRLSSFPKNEALSKSLRFLDISTNNLQNLAVEKAE 921
Score = 33.1 bits (72), Expect = 0.043
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Frame = -2
Query: 674 LDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESLIN-LKKLEVLNISNNFVQTLPV 498
+D S L+ + D +L ++ KL L +S+I L +E + ++ N ++
Sbjct: 642 IDFSFCPLTTI-DPAFSYSNLVYFDISHAKLIGLKDSVIETLVNVETVKVNYNHFTSISD 700
Query: 497 CLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSELYVIE-LNLS 321
+ + NLK + +N ++ + L+ L LDL N I P + ++ ++ +NLS
Sbjct: 701 AISAMQNLKYLSCTNCEMSYVSPNLGKLKHLVHLDLHANNIKIFPEEVWQVSSLKVVNLS 760
Query: 320 QNEISLI 300
N + I
Sbjct: 761 SNILEKI 767
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 63.7 bits (148), Expect = 3e-11
Identities = 51/167 (30%), Positives = 93/167 (55%), Gaps = 5/167 (2%)
Frame = -2
Query: 689 DVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQ 510
D L NL+L NK+ V+ ++L L +L++L + NK+ E+ L+KL +L+I +N +
Sbjct: 148 DRLTNLELGGNKIRVI-ENLDTLVNLEKLWVGKNKITKF-ENFEKLQKLSLLSIQSNRIT 205
Query: 509 TLP--VCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSELYVI 336
CL + L+++Y S+N L +F I L++L++LD+S+N I + Y ++
Sbjct: 206 QFENLACLSHC--LRELYVSHNGLTSF-SGIEVLENLEILDVSNNMIKHLSYLAGLKNLV 262
Query: 335 ELNLSQNEISL---IGEDLHQAPRLKILRLDENCLSLDEIKPSLLRD 204
EL S NE+S I ++L +L+ + + N L + P++ R+
Sbjct: 263 ELWASNNELSSFQEIEDELSGLKKLETVYFEGN--PLQKTNPAVYRN 307
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 56.4 bits (130), Expect = 4e-09
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Frame = -2
Query: 737 ADCKLKEIPIDVFSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESL- 561
+ CKLK IP +VF L +LDLS N+L+ +P L +L L LNL SNK+
Sbjct: 340 SSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKITGCRTFYH 399
Query: 560 INLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFP--KQILGLQSLDVLDLS 387
I+L L++L +S N + +L L+N+ +L+++ +N + ++++G + + LS
Sbjct: 400 ISLSHLQILVLSRNHLTSLS-GLENVPSLEKLDIRDNSITDVVEFRRLVGNTNFEEAYLS 458
Query: 386 HNKITE 369
N T+
Sbjct: 459 LNPFTK 464
Score = 52.0 bits (119), Expect = 9e-08
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Frame = -2
Query: 482 NNLKQVYASNNKLQAFPKQI-LGLQSLDVLDLSHNKITEIPYGMSEL-YVIELNLSQNEI 309
+ L + S+ KL++ PK + L LQSL LDLS N++TEIPY + EL + LNL+ N+I
Sbjct: 332 SQLLYLRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKI 391
Query: 308 SLIGEDLH-QAPRLKILRLDENCL-SLDEIK--PSL----LRDSKIHTV 186
+ H L+IL L N L SL ++ PSL +RD+ I V
Sbjct: 392 TGCRTFYHISLSHLQILVLSRNHLTSLSGLENVPSLEKLDIRDNSITDV 440
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 29.5 bits (63), Expect = 0.53
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 578 ALPESLINLKKLEVLNISNNFVQTLPV 498
AL ESL +LKK E LN+S LP+
Sbjct: 38 ALTESLKDLKKFETLNVSGKVPHVLPL 64
>SPAC3F10.02c |trk1|sptrk|potassium ion transporter
Trk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 841
Score = 28.3 bits (60), Expect = 1.2
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = +1
Query: 478 LFKFFKQTGSVCTKLFDIFKTSSFFKFMSDSGKA*SLLLSKFNCFRCFNLLKSSGKTESL 657
LF TG C I+ T + F + +A + LL RCF LL SG T L
Sbjct: 545 LFIIAGNTGFPCFFRTFIWTTYKLYPFSFEKKEAMAFLLDHPR--RCFTLLFPSGATWVL 602
Query: 658 FF 663
FF
Sbjct: 603 FF 604
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 539 VLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFPK 429
V SNN Q +P+ LK+ N+ +YAS N FP+
Sbjct: 101 VFGTSNNH-QIVPLTLKDGNDFGALYASLNTTPHFPQ 136
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 521 NFVQTLPVCLKNLNNLKQVYASNNKLQA 438
N ++ P+ LKN NNL + AS+N L +
Sbjct: 788 NALRQAPIGLKNTNNLSERNASSNLLNS 815
>SPBC244.02c |||U3 snoRNP-associated protein Utp6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 488
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +2
Query: 404 LSSVIQVFVSEKPVIYYCLHKPVLNYLNSSNKLGV 508
L + + FVS ++ C PV+ Y+ N +G+
Sbjct: 289 LQNYVGFFVSVLDALFECFDVPVVQYMYQENIIGI 323
>SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 585
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 449 YYCLHKPVLNYLNSSNKLGVFVQSCLIYLK 538
+ + KP L + + +N+LG+ V C I K
Sbjct: 346 FIAIVKPNLTFTDIANRLGISVSECFILAK 375
>SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1018
Score = 25.8 bits (54), Expect = 6.5
Identities = 31/131 (23%), Positives = 59/131 (45%)
Frame = -2
Query: 581 QALPESLINLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLD 402
+ +P + L L + N+ ++ V+ L + +K+ L + + KL + ++ S
Sbjct: 808 EGIPLAFKLLDTLNLQNVGDSSVKALSIIIKDDPALSKENSYVEKL-LYKQRFYASVSPK 866
Query: 401 VLDLSHNKITEIPYGMSELYVIELNLSQNEISLIGEDLHQAPRLKILRLDENCLSLDEIK 222
+L+ I+ G LY++ L+ N I + +++ IL L CLSL +I
Sbjct: 867 ILE----HISTATGGEKSLYLMLLS---NVIGNVPKEIVIPDMPSILPLLLQCLSLSDIS 919
Query: 221 PSLLRDSKIHT 189
L + IHT
Sbjct: 920 VKLSTLNVIHT 930
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.4 bits (53), Expect = 8.6
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -2
Query: 623 LKHLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQTL 504
L+ L++ NLD+NK Q SL+++KK L S +L
Sbjct: 2576 LRQLQKFNLDANKFQF--TSLLDIKKWLNLGPSEKLFSSL 2613
>SPBC646.12c |gap1|src1, sar1|GTPase activating protein
Gap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 766
Score = 25.4 bits (53), Expect = 8.6
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = -2
Query: 590 NKLQALPESLINLKKLEVLNISNNFVQTLPVCLKNLNNLKQVY---ASNNKLQAFPKQIL 420
N + P+ +++ L V N Q P NL ++V A N +Q Q+L
Sbjct: 226 NDVAIHPDLQLDIHPLSVYRYLVNTGQLSPSEDDNLLTNEEVSEFPAVKNAIQERSAQLL 285
Query: 419 GLQSLDVLDLSHNKITEIPYGMSELYVIELNLS 321
L + LD N I EIPYG+ + + NL+
Sbjct: 286 -LLTKRFLDAVLNSIDEIPYGIRWVCKLIRNLT 317
>SPAP27G11.09c |||GTP cyclohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 326
Score = 25.4 bits (53), Expect = 8.6
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +2
Query: 206 LEANLV*FHPNSNSSHPIAISLILELG 286
++ANL+ HP S+ +A +++++LG
Sbjct: 232 VQANLLLQHPADGRSYAVATAMLMDLG 258
>SPBC27.02c |ask1|mug181|DASH complex subunit
Ask1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 307
Score = 25.4 bits (53), Expect = 8.6
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -2
Query: 476 LKQVYASNNKLQAFPKQILGLQSLDVLDLSHNK-ITEIPYGMS-ELYVIELNLSQNEISL 303
L +V +N ++Q P++ LQS +V+D+ + ++ P M ++ + S + +SL
Sbjct: 180 LHRVLDTNWQVQVTPREPKNLQSQEVMDIDSSPFVSPSPISMKMDMPSLNDRNSSHALSL 239
Query: 302 IGEDLHQA 279
E H++
Sbjct: 240 FAEFEHES 247
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,874,132
Number of Sequences: 5004
Number of extensions: 58153
Number of successful extensions: 219
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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