Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_I06
(741 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 61 1e-11
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.99
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 3.0
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 3.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.3
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 5.3
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 7.0
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 9.2
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 9.2
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 60.9 bits (141), Expect = 1e-11
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 6/191 (3%)
Frame = -2
Query: 725 LKEIPIDVFSLCDVLRNLDLSKNKLSVLPDD-LSKLKHLKQLNLDSNKLQALPESLIN-L 552
L I +F L+ LDL N + + + L +L L L NKL+ + L N L
Sbjct: 347 LTHIDARMFKDLFFLQILDLRNNSIDRIESNAFLPLYNLHTLELSDNKLRTVGAQLFNGL 406
Query: 551 KKLEVLNISNNFVQTL-PVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKI 375
L L +S N + ++ P+ +N ++LK++ S N+L + P + L L LDL N+I
Sbjct: 407 FVLNRLTLSGNAIASIDPLAFRNCSDLKELDLSGNELTSVPDALRDLALLKTLDLGENRI 466
Query: 374 TEIPYGMSEL--YVIELNLSQNEISLIGED-LHQAPRLKILRLDENCLSLDEIKPSLLRD 204
+ G + L L N+I + L P L+IL L N + E + + R+
Sbjct: 467 SNFYNGSFRNLDQLTGLRLIGNDIGNLSRGMLWDLPNLQILNLARNKVQHVE-RYAFERN 525
Query: 203 SKIHTVSVDGN 171
++ + +DGN
Sbjct: 526 MRLEAIRLDGN 536
Score = 51.2 bits (117), Expect = 1e-08
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 6/183 (3%)
Frame = -2
Query: 701 FSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPE-SLINLKKLEVLNIS 525
F C L+ LDLS N+L+ +PD L L LK L+L N++ S NL +L L +
Sbjct: 427 FRNCSDLKELDLSGNELTSVPDALRDLALLKTLDLGENRISNFYNGSFRNLDQLTGLRLI 486
Query: 524 NNFVQTLP-VCLKNLNNLKQVYASNNKLQAFPKQILGL-QSLDVLDLSHNKITEIPYGMS 351
N + L L +L NL+ + + NK+Q + L+ + L N +++I +
Sbjct: 487 GNDIGNLSRGMLWDLPNLQILNLARNKVQHVERYAFERNMRLEAIRLDGNFLSDINGVFT 546
Query: 350 EL-YVIELNLSQNEISLIGEDLHQAP-RLKILRLDENCL-SLDEIKPSLLRDSKIHTVSV 180
+ ++ LNLS+N I D P LK L + N + SL +RDSK+ T+
Sbjct: 547 SIASLLLLNLSENHIEWF--DYAFIPGNLKWLDIHGNFIESLGNYYK--IRDSKVKTLDA 602
Query: 179 DGN 171
N
Sbjct: 603 SHN 605
Score = 45.6 bits (103), Expect = 5e-07
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Frame = -2
Query: 683 LRNLDLSKNKL-SVLPDDLSKLKHLKQLNLDSNKLQALPESLI-NLKKLEVLNISNNFVQ 510
L+ L L +N + + D L+ L L+ N N L +LPE L + + L ++++ N ++
Sbjct: 239 LQELHLQRNAIVEIAGDALTGLTVLRTFNASYNSLDSLPEGLFASTRDLREIHLAYNGLR 298
Query: 509 TLPVCL-KNLNNLKQVYASNNKL---QAFPKQILGLQSLDVLDLSHNKITEIPYGM-SEL 345
LP + L L + + N+L + LGL L VL+LS+N +T I M +L
Sbjct: 299 DLPKGIFTRLEQLLVLNLAGNRLGSDRVDETTFLGLIRLIVLNLSYNMLTHIDARMFKDL 358
Query: 344 YVIE-LNLSQNEISLI 300
+ ++ L+L N I I
Sbjct: 359 FFLQILDLRNNSIDRI 374
Score = 40.3 bits (90), Expect = 2e-05
Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Frame = -2
Query: 593 SNKLQALPESLINLKKLEVLNISNNFVQTLPV-CLKNLNNLKQVYASNNKLQAFPKQILG 417
S L+ P+S + L++L L I + VQ LPV L +L+NL+ + + N+L+ +G
Sbjct: 133 SRFLELAPDSFLGLRELHTLEIVESNVQALPVNSLCSLDNLQTLNLTENRLRDI--NDIG 190
Query: 416 LQSLDVLDLSHNKITEIPYGMSELYVIELNLSQNEISLIGEDLHQAPRLKILRLDE 249
L D D S + +++ + L+LS+NEI+ + E+ +P L + +L E
Sbjct: 191 LNRRDSDDGSDGNDGDESSCRADIRI--LDLSRNEITRLQEN---SPLLDLRQLQE 241
Score = 37.5 bits (83), Expect = 1e-04
Identities = 40/168 (23%), Positives = 84/168 (50%), Gaps = 24/168 (14%)
Frame = -2
Query: 740 IADCKLKEIPIDVFSLCDVLRNLDLSKNKLSVLPD-----------------DLSKLK-H 615
I + ++ +P++ D L+ L+L++N+L + D D S +
Sbjct: 154 IVESNVQALPVNSLCSLDNLQTLNLTENRLRDINDIGLNRRDSDDGSDGNDGDESSCRAD 213
Query: 614 LKQLNLDSNKLQALPES--LINLKKLEVLNISNN-FVQTLPVCLKNLNNLKQVYASNNKL 444
++ L+L N++ L E+ L++L++L+ L++ N V+ L L L+ AS N L
Sbjct: 214 IRILDLSRNEITRLQENSPLLDLRQLQELHLQRNAIVEIAGDALTGLTVLRTFNASYNSL 273
Query: 443 QAFPKQIL-GLQSLDVLDLSHNKITEIPYGM-SEL-YVIELNLSQNEI 309
+ P+ + + L + L++N + ++P G+ + L ++ LNL+ N +
Sbjct: 274 DSLPEGLFASTRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAGNRL 321
Score = 37.1 bits (82), Expect = 2e-04
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Frame = -2
Query: 653 LSVLPDDLSKLKHLKQLNLDSNKLQALP-ESLINLKKLEVLNISNNFVQTLPVCLKNLNN 477
L + PD L+ L L + + +QALP SL +L L+ LN++ N ++ + N +
Sbjct: 136 LELAPDSFLGLRELHTLEIVESNVQALPVNSLCSLDNLQTLNLTENRLRDINDIGLNRRD 195
Query: 476 LKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSEL---YVIELNLSQNEI- 309
N+ ++ + + +LDLS N+IT + L + EL+L +N I
Sbjct: 196 SDDGSDGNDGDESSCR-----ADIRILDLSRNEITRLQENSPLLDLRQLQELHLQRNAIV 250
Query: 308 SLIGEDLHQAPRLKILRLDENCLSLDEIKPSLLRDSK 198
+ G+ L L+ N SLD + L ++
Sbjct: 251 EIAGDALTGLTVLRTFNASYN--SLDSLPEGLFASTR 285
Score = 36.3 bits (80), Expect = 3e-04
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = -2
Query: 725 LKEIPIDVFSLCDVLRNLDLSKNKLSVLPD-DLSKLKHLKQLNLDSNKLQALPE-SLINL 552
++ I F+ + L+ L L N++ L + +L HL++L L +N + + + + L
Sbjct: 830 IESIQNRTFNGLNNLQILHLEDNRIRELKGFEFERLSHLRELYLQNNLIGFIGNLTFLPL 889
Query: 551 KKLEVLNISNNFVQTLPVCLKNLN 480
+ LE+L +S N + T PV LN
Sbjct: 890 RSLEILRLSGNRLVTFPVWQVTLN 913
Score = 35.9 bits (79), Expect = 4e-04
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Frame = -2
Query: 683 LRNLDLSKNKLS-VLPDDLSKLKHLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQT 507
L+ L+L++NK+ V + L+ + LD N L + ++ L +LN+S N ++
Sbjct: 504 LQILNLARNKVQHVERYAFERNMRLEAIRLDGNFLSDINGVFTSIASLLLLNLSENHIEW 563
Query: 506 LPVCLKNLNNLKQVYASNNKLQAFPKQILGLQS-LDVLDLSHNKITEI-PYGMSELYVIE 333
NLK + N +++ S + LD SHN+ITE+ P + + +
Sbjct: 564 FDYAFIP-GNLKWLDIHGNFIESLGNYYKIRDSKVKTLDASHNRITELSPLSVPDSVEL- 621
Query: 332 LNLSQNEISLI 300
L ++ N I+L+
Sbjct: 622 LFINNNYINLV 632
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.6 bits (51), Expect = 0.99
Identities = 19/78 (24%), Positives = 39/78 (50%)
Frame = -2
Query: 569 ESLINLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDL 390
E +N K +++ V++ + + L LKQ Y N+KL+ K + L+ L ++DL
Sbjct: 316 EKFLNYLKRGGKTLTSISVESNTMFINILKFLKQKYVKNSKLEKVIKHDI-LRML-IIDL 373
Query: 389 SHNKITEIPYGMSELYVI 336
++ + +E+ +I
Sbjct: 374 RKKQLKSLEDWENEMNII 391
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.0 bits (47), Expect = 3.0
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -2
Query: 539 VLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFP 432
+ ++SNN++ + N N K++Y + N ++ P
Sbjct: 82 ISSLSNNYISNISNYNNNNNYNKKLYYNINYIEQIP 117
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.0 bits (47), Expect = 3.0
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -2
Query: 539 VLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFP 432
+ ++SNN++ + N N K++Y + N ++ P
Sbjct: 320 ISSLSNNYISNISNYNNNNNYNKKLYYNINYIEQIP 355
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 566 IQVKLE-VYYYLNLIVSGVLI 625
IQ++ +YY+ NLIV VLI
Sbjct: 188 IQIRRRTLYYFFNLIVPCVLI 208
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 566 IQVKLE-VYYYLNLIVSGVLI 625
IQ++ +YY+ NLIV VLI
Sbjct: 188 IQIRRRTLYYFFNLIVPCVLI 208
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 566 IQVKLE-VYYYLNLIVSGVLI 625
IQ++ +YY+ NLIV VLI
Sbjct: 188 IQIRRRTLYYFFNLIVPCVLI 208
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 566 IQVKLE-VYYYLNLIVSGVLI 625
IQ++ +YY+ NLIV VLI
Sbjct: 188 IQIRRRTLYYFFNLIVPCVLI 208
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 566 IQVKLE-VYYYLNLIVSGVLI 625
IQ++ +YY+ NLIV VLI
Sbjct: 188 IQIRRRTLYYFFNLIVPCVLI 208
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 566 IQVKLE-VYYYLNLIVSGVLI 625
IQ++ +YY+ NLIV VLI
Sbjct: 188 IQIRRRTLYYFFNLIVPCVLI 208
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 566 IQVKLE-VYYYLNLIVSGVLI 625
IQ++ +YY+ NLIV VLI
Sbjct: 256 IQIRRRTLYYFFNLIVPCVLI 276
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 566 IQVKLE-VYYYLNLIVSGVLI 625
IQ++ +YY+ NLIV VLI
Sbjct: 256 IQIRRRTLYYFFNLIVPCVLI 276
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 563 VIQVKLEVYYYLNLIVSGVLI 625
VI + +YY+ NLIV VLI
Sbjct: 225 VIIRRRTLYYFFNLIVPCVLI 245
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.8 bits (44), Expect = 7.0
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = -2
Query: 323 SQNEISLIGEDLHQAPRLKILRLDENCLSLDEIKPSLLRDSKIHTVSVDGN 171
S N +L G+D +A +L + +C+ + +DSK + V + +
Sbjct: 226 SFNSAALEGDDQQRAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNS 276
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 389 SHNKITEIPYGMSELYVIE 333
SH+K+ EIP + Y I+
Sbjct: 526 SHHKLIEIPEDLKYFYEID 544
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 389 SHNKITEIPYGMSELYVIE 333
SH+K+ EIP + Y I+
Sbjct: 526 SHHKLIEIPEDLKYFYEID 544
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,556
Number of Sequences: 438
Number of extensions: 3958
Number of successful extensions: 27
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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