Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_I02
         (784 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1699 - 28807154-28807218,28807324-28807466,28807570-288077...   127   9e-30
03_02_0903 + 12285874-12285918,12286715-12286820,12286906-122869...   114   6e-26
09_02_0462 + 9583558-9584910                                           60   3e-09
06_01_0417 - 2972877-2973876,2973946-2974851,2975823-2976616,297...    30   1.8  
05_06_0033 + 25074301-25074393,25074680-25075203,25076367-250764...    28   9.6  

>07_03_1699 -
           28807154-28807218,28807324-28807466,28807570-28807715,
           28808142-28808242,28808314-28808365,28808483-28808538,
           28808616-28808721,28809314-28809358
          Length = 237

 Score =  127 bits (307), Expect = 9e-30
 Identities = 56/94 (59%), Positives = 76/94 (80%)
 Frame = -3

Query: 779 RVFDIMREKNPSMVSGKKQKFIMRPPQVVRIGTKKTSFANFTEICKTLHRQAKHLLDFLL 600
           RVF+I+RE NP + +G +++ +MRPPQV+R GTKKT F NF ++CKT+HRQ +H++ FLL
Sbjct: 124 RVFNILRENNPDL-AGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPEHVMMFLL 182

Query: 599 AELGTSGSVDGNSQLIIKGRFQQKQIENVLRRYI 498
           AE+GTSGS+DG  +L+IKGRF  K  E +LRRYI
Sbjct: 183 AEMGTSGSLDGQQRLVIKGRFAPKNFEAILRRYI 216


>03_02_0903 +
           12285874-12285918,12286715-12286820,12286906-12286961,
           12287062-12287113,12287182-12287282,12287891-12288287,
           12288852-12288937,12289061-12289078
          Length = 286

 Score =  114 bits (275), Expect = 6e-26
 Identities = 52/93 (55%), Positives = 69/93 (74%), Gaps = 3/93 (3%)
 Frame = -3

Query: 683 TKKTSFANFTEIC---KTLHRQAKHLLDFLLAELGTSGSVDGNSQLIIKGRFQQKQIENV 513
           ++K ++   TEI      +HRQ +H++ FLLAE+GTSGS+DG  +L+IKGRF  K  E +
Sbjct: 188 SEKINYHELTEIIVYTSRMHRQPEHVMMFLLAEMGTSGSLDGQQRLVIKGRFAPKNFEAI 247

Query: 512 LRRYIKEYVTCHTCRSPDTILQKDTRLFFLQCE 414
           LRRYI EYV C+ C+SPDTIL K+ RLFFL+CE
Sbjct: 248 LRRYINEYVICNGCKSPDTILSKENRLFFLRCE 280



 Score = 63.7 bits (148), Expect = 2e-10
 Identities = 27/47 (57%), Positives = 38/47 (80%)
 Frame = -3

Query: 779 RVFDIMREKNPSMVSGKKQKFIMRPPQVVRIGTKKTSFANFTEICKT 639
           RVF+I+RE NP + +G +++ +MRPPQV+R GTKKT F NF ++CKT
Sbjct: 124 RVFNILRENNPDL-AGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKT 169


>09_02_0462 + 9583558-9584910
          Length = 450

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
 Frame = -3

Query: 677 KTSFANFTEICKTLHRQAKHLLDFLLAELGTSGSVDGNSQL-IIKGRFQQKQIENVLRRY 501
           KT+  N  +I K L R A +   +   ELG     D  + + ++ G     ++  +L  +
Sbjct: 35  KTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGISLVNGAHDTAKLAGLLENF 94

Query: 500 IKEYVTCHTCRSPDT-ILQKDTRLFFLQCETCG 405
           IK+YV C+ C +P+T +L   T++  L+C  CG
Sbjct: 95  IKKYVQCYGCGNPETEVLISKTQMITLKCAACG 127


>06_01_0417 -
           2972877-2973876,2973946-2974851,2975823-2976616,
           2977887-2977977,2978305-2978384
          Length = 956

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 6/42 (14%)
 Frame = +3

Query: 294 IS*SLSTNFLCSLCTDGSTLASH------SLETRFNASH*TT 401
           +S S+  NF   LC +GSTLASH      S+ + +N+S  T+
Sbjct: 557 VSRSIEENFASFLCDNGSTLASHDKIRRLSIHSSYNSSQKTS 598


>05_06_0033 +
           25074301-25074393,25074680-25075203,25076367-25076442,
           25076549-25076641,25077167-25077253,25077338-25078095,
           25078447-25078575,25079145-25079265
          Length = 626

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -3

Query: 758 EKNPSMVSGKKQKFIMRPPQVVRIGTKKTSFANFTEICKTLH-RQAKHLLDFL 603
           E+   + S +KQ F++R P+V+ I  K+    N  +I + +  ++   L DF+
Sbjct: 205 ERCKKLTSARKQLFVLRAPKVLVIQLKRFEGINGGKINRNIEFKETLFLSDFM 257


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,434,560
Number of Sequences: 37544
Number of extensions: 443708
Number of successful extensions: 1054
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)