Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_I02
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75712-12|CAB00049.1| 250|Caenorhabditis elegans Hypothetical p... 206 2e-53
Z75533-12|CAA99824.1| 250|Caenorhabditis elegans Hypothetical p... 206 2e-53
U64857-14|AAL16313.1| 402|Caenorhabditis elegans Hypothetical p... 56 3e-08
U64857-13|AAC25859.2| 436|Caenorhabditis elegans Hypothetical p... 56 3e-08
U64857-12|AAN84849.1| 413|Caenorhabditis elegans Hypothetical p... 56 3e-08
Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z50070-5|CAA90401.2| 270|Caenorhabditis elegans Hypothetical pr... 29 3.7
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 28 6.6
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 28 6.6
AF040651-4|AAB95014.1| 234|Caenorhabditis elegans Hypothetical ... 28 8.7
>Z75712-12|CAB00049.1| 250|Caenorhabditis elegans Hypothetical
protein K04G2.1 protein.
Length = 250
Score = 206 bits (502), Expect = 2e-53
Identities = 91/141 (64%), Positives = 118/141 (83%)
Frame = -3
Query: 776 VFDIMREKNPSMVSGKKQKFIMRPPQVVRIGTKKTSFANFTEICKTLHRQAKHLLDFLLA 597
V+ +M++KNP +G K+KF ++ P+V R G+KKT+F+NF EIC+ + RQ KH+L FLLA
Sbjct: 96 VYQVMKDKNPDF-AGDKKKFAIKLPEVARAGSKKTAFSNFLEICRLMKRQDKHVLQFLLA 154
Query: 596 ELGTSGSVDGNSQLIIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTILQKDTRLFFLQC 417
ELGT+GS+DG++ LI+KGR+QQKQ E+VLR+YIKEYV CHTC+SP+T L KDTRLFFLQC
Sbjct: 155 ELGTTGSIDGSNCLIVKGRWQQKQFESVLRKYIKEYVMCHTCKSPETQLTKDTRLFFLQC 214
Query: 416 ETCGSRCSVASIKSGFQAVTG 354
CGSRCSV +IKSGF+AV G
Sbjct: 215 TNCGSRCSVTAIKSGFKAVVG 235
>Z75533-12|CAA99824.1| 250|Caenorhabditis elegans Hypothetical
protein K04G2.1 protein.
Length = 250
Score = 206 bits (502), Expect = 2e-53
Identities = 91/141 (64%), Positives = 118/141 (83%)
Frame = -3
Query: 776 VFDIMREKNPSMVSGKKQKFIMRPPQVVRIGTKKTSFANFTEICKTLHRQAKHLLDFLLA 597
V+ +M++KNP +G K+KF ++ P+V R G+KKT+F+NF EIC+ + RQ KH+L FLLA
Sbjct: 96 VYQVMKDKNPDF-AGDKKKFAIKLPEVARAGSKKTAFSNFLEICRLMKRQDKHVLQFLLA 154
Query: 596 ELGTSGSVDGNSQLIIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTILQKDTRLFFLQC 417
ELGT+GS+DG++ LI+KGR+QQKQ E+VLR+YIKEYV CHTC+SP+T L KDTRLFFLQC
Sbjct: 155 ELGTTGSIDGSNCLIVKGRWQQKQFESVLRKYIKEYVMCHTCKSPETQLTKDTRLFFLQC 214
Query: 416 ETCGSRCSVASIKSGFQAVTG 354
CGSRCSV +IKSGF+AV G
Sbjct: 215 TNCGSRCSVTAIKSGFKAVVG 235
>U64857-14|AAL16313.1| 402|Caenorhabditis elegans Hypothetical
protein C37C3.2b protein.
Length = 402
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = -3
Query: 677 KTSFANFTEICKTLHRQAKHLLDFLLAELGTSGSVDG-NSQLIIKGRFQQKQIENVLRRY 501
KT +N +EI K L R + + ELG + D N + I+ G +++++L +
Sbjct: 33 KTVISNMSEIAKALERPPMYPTKYFGCELGAQTNFDAKNERYIVNGEHDANKLQDILDGF 92
Query: 500 IKEYVTCHTCRSPDTILQKDTRLFFLQCETCG 405
IK++V C +C +P+T L +C+ CG
Sbjct: 93 IKKFVLCKSCENPETQLFVRKNNIKSKCKACG 124
>U64857-13|AAC25859.2| 436|Caenorhabditis elegans Hypothetical
protein C37C3.2a protein.
Length = 436
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = -3
Query: 677 KTSFANFTEICKTLHRQAKHLLDFLLAELGTSGSVDG-NSQLIIKGRFQQKQIENVLRRY 501
KT +N +EI K L R + + ELG + D N + I+ G +++++L +
Sbjct: 33 KTVISNMSEIAKALERPPMYPTKYFGCELGAQTNFDAKNERYIVNGEHDANKLQDILDGF 92
Query: 500 IKEYVTCHTCRSPDTILQKDTRLFFLQCETCG 405
IK++V C +C +P+T L +C+ CG
Sbjct: 93 IKKFVLCKSCENPETQLFVRKNNIKSKCKACG 124
>U64857-12|AAN84849.1| 413|Caenorhabditis elegans Hypothetical
protein C37C3.2c protein.
Length = 413
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = -3
Query: 677 KTSFANFTEICKTLHRQAKHLLDFLLAELGTSGSVDG-NSQLIIKGRFQQKQIENVLRRY 501
KT +N +EI K L R + + ELG + D N + I+ G +++++L +
Sbjct: 33 KTVISNMSEIAKALERPPMYPTKYFGCELGAQTNFDAKNERYIVNGEHDANKLQDILDGF 92
Query: 500 IKEYVTCHTCRSPDTILQKDTRLFFLQCETCG 405
IK++V C +C +P+T L +C+ CG
Sbjct: 93 IKKFVLCKSCENPETQLFVRKNNIKSKCKACG 124
>Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical
protein T27D12.3 protein.
Length = 146
Score = 31.1 bits (67), Expect = 0.93
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 8 EYTDVSYTSISGFNWDTFDKNKYVFHI 88
E+TD S T GF W T D N Y++++
Sbjct: 118 EWTDGSTTGTDGFIWKTGDPNNYLYNL 144
>Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical
protein F54G8.2 protein.
Length = 812
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = -3
Query: 773 FDIMREKNPSMVSGKKQKFIMRPPQVVRIGTKKTSFANFTEICKTLHRQAKHLLDFLLAE 594
F +MREK P + + + + +GT +T + CK LH Q L D +
Sbjct: 595 FHVMREKFPEKFNSRMRNKLW----YFELGTSET----LSSSCKNLHEQIDILCDGESID 646
Query: 593 LGTSGSVDGNSQLII 549
LG S++G + L I
Sbjct: 647 LGQDASLEGIALLNI 661
>Z50070-5|CAA90401.2| 270|Caenorhabditis elegans Hypothetical
protein F43G6.4 protein.
Length = 270
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 467 SPDTILQKDTRLFFLQCETCGSRCSVASIKSGF 369
SPD ++KD F+++C TC CS A + S F
Sbjct: 187 SPD--MKKDDE-FYMKCTTCHQPCSYAIVMSAF 216
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -3
Query: 527 QIENVLRRYIKEYVTCHTC--RSPDTILQKDTRLFFLQCETC 408
Q+ R +KE +TC +C R D I+ K LF CETC
Sbjct: 767 QVLEEANRQMKETLTCPSCKTRPKDCIMLKCYHLF---CETC 805
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -3
Query: 527 QIENVLRRYIKEYVTCHTC--RSPDTILQKDTRLFFLQCETC 408
Q+ R +KE +TC +C R D I+ K LF CETC
Sbjct: 770 QVLEEANRQMKETLTCPSCKTRPKDCIMLKCYHLF---CETC 808
>AF040651-4|AAB95014.1| 234|Caenorhabditis elegans Hypothetical
protein W04H10.4 protein.
Length = 234
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 8 EYTDVSYTSISGFNWDTFDKNKYVFHI 88
E+TD S T GF W D N Y +++
Sbjct: 176 EWTDGSTTGTDGFIWKAGDPNNYQYNL 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,237,912
Number of Sequences: 27780
Number of extensions: 422991
Number of successful extensions: 1034
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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