Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_H23
         (629 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0140 + 5759374-5759567,5759972-5760194                           31   0.75 
05_03_0467 - 14366969-14367742,14368335-14368754,14370339-143704...    30   1.7  
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...    27   9.3  
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...    27   9.3  

>10_02_0140 + 5759374-5759567,5759972-5760194
          Length = 138

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -2

Query: 370 LCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAAETFHKDKKPN 242
           +CI+DPF+ S +    +  + +  + + F+ AAE  H D  P+
Sbjct: 82  ICIEDPFETSHDLGRVVDNRSIWALREEFERAAEILHLDPNPS 124


>05_03_0467 -
           14366969-14367742,14368335-14368754,14370339-14370496,
           14370571-14370664,14371536-14371649,14371794-14371985,
           14372095-14372176,14372280-14372471,14372773-14373371
          Length = 874

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 214 TENIYQEVKYKHRKTKFLHNKVQKV 140
           TE +Y E  YKHRK++F++ K+  +
Sbjct: 249 TEWVYNENIYKHRKSRFVYTKLLSI 273


>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = -2

Query: 592 NNYLHRTTNNESLYKL-LGGFFSYYG--TFDFEENIICPYLGFP 470
           N Y HRT  N+ +YK+   G  S+     FD  E  I P  GFP
Sbjct: 273 NGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFP 316


>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = -2

Query: 592 NNYLHRTTNNESLYKL-LGGFFSYYG--TFDFEENIICPYLGFP 470
           N Y HRT  N+ +YK+   G  S+     FD  E  I P  GFP
Sbjct: 273 NGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFP 316


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,542,106
Number of Sequences: 37544
Number of extensions: 257045
Number of successful extensions: 503
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)