Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_H23
(629 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC061703-1|AAH61703.1| 582|Homo sapiens PAP associated domain c... 32 1.5
AY574903-1|AAT81412.1| 1127|Homo sapiens regulated in COPD kinas... 32 1.5
AY574901-1|AAT81410.1| 1328|Homo sapiens regulated in COPD kinas... 32 1.5
AY364242-1|AAQ76801.1| 582|Homo sapiens hypothetical protein pr... 32 1.5
AL353796-1|CAH72262.1| 582|Homo sapiens novel protein protein. 32 1.5
AL161651-3|CAI14218.1| 582|Homo sapiens novel protein protein. 32 1.5
AK022188-1|BAB13981.1| 582|Homo sapiens protein ( Homo sapiens ... 32 1.5
AK001348-1|BAA91641.1| 582|Homo sapiens protein ( Homo sapiens ... 32 1.5
AB194709-1|BAD98252.1| 582|Homo sapiens mitochondrial polyA pol... 32 1.5
BC128263-1|AAI28264.1| 874|Homo sapiens terminal uridylyl trans... 32 1.9
BC110910-1|AAI10911.1| 874|Homo sapiens terminal uridylyl trans... 32 1.9
BC005013-1|AAH05013.2| 578|Homo sapiens TUT1 protein protein. 32 1.9
AK026000-1|BAB15314.1| 874|Homo sapiens protein ( Homo sapiens ... 32 1.9
AK025920-1|BAB15282.1| 535|Homo sapiens protein ( Homo sapiens ... 32 1.9
BC125047-1|AAI25048.1| 449|Homo sapiens GPR39 protein protein. 31 2.5
BC125046-1|AAI25047.1| 453|Homo sapiens GPR39 protein protein. 31 2.5
AF034633-1|AAC26082.1| 453|Homo sapiens GPR39 protein. 31 2.5
AC079773-1|AAX93106.1| 167|Homo sapiens unknown protein. 31 2.5
BC070104-1|AAH70104.1| 707|Homo sapiens KIAA1841 protein. 31 4.5
BC039298-1|AAH39298.1| 572|Homo sapiens KIAA1841 protein protein. 31 4.5
AK131267-1|BAD18445.1| 379|Homo sapiens protein ( Homo sapiens ... 31 4.5
AB058744-1|BAB47470.1| 523|Homo sapiens KIAA1841 protein protein. 31 4.5
>BC061703-1|AAH61703.1| 582|Homo sapiens PAP associated domain
containing 1 protein.
Length = 582
Score = 32.3 bits (70), Expect = 1.5
Identities = 32/99 (32%), Positives = 45/99 (45%)
Frame = -2
Query: 568 NNESLYKLLGGFFSYYGTFDFEENIICPYLGFPIRKKSFDLFLTKFSLYQHNVAAEVCKP 389
N E+L LL FF Y+G F F++N I IR+ E KP
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI------NIRQ-----------------GREQNKP 469
Query: 388 LRLDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAA 272
+PL IQ+PF+ S N S N+ + + VDL + +A
Sbjct: 470 D--SSPLYIQNPFETSLNISKNVSQSQLQKFVDLARESA 506
>AY574903-1|AAT81412.1| 1127|Homo sapiens regulated in COPD kinase
transcript variant 3 protein.
Length = 1127
Score = 32.3 bits (70), Expect = 1.5
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = -2
Query: 373 PLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQE 194
PL +Q C+VN+ L ++L S + T ++ P+FL+E +K+ E
Sbjct: 140 PLVLQKEESSRELCNVNLGFLLPRSCLELNISKSVT--REDAPHFLKEQQRKSEEFSTSH 197
Query: 193 VKYKHRKTKFL 161
+KY R KFL
Sbjct: 198 MKYSGRSIKFL 208
>AY574901-1|AAT81410.1| 1328|Homo sapiens regulated in COPD kinase
transcript variant 1 protein.
Length = 1328
Score = 32.3 bits (70), Expect = 1.5
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = -2
Query: 373 PLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQE 194
PL +Q C+VN+ L ++L S + T ++ P+FL+E +K+ E
Sbjct: 140 PLVLQKEESSRELCNVNLGFLLPRSCLELNISKSVT--REDAPHFLKEQQRKSEEFSTSH 197
Query: 193 VKYKHRKTKFL 161
+KY R KFL
Sbjct: 198 MKYSGRSIKFL 208
>AY364242-1|AAQ76801.1| 582|Homo sapiens hypothetical protein
protein.
Length = 582
Score = 32.3 bits (70), Expect = 1.5
Identities = 32/99 (32%), Positives = 45/99 (45%)
Frame = -2
Query: 568 NNESLYKLLGGFFSYYGTFDFEENIICPYLGFPIRKKSFDLFLTKFSLYQHNVAAEVCKP 389
N E+L LL FF Y+G F F++N I IR+ E KP
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI------NIRQ-----------------GREQNKP 469
Query: 388 LRLDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAA 272
+PL IQ+PF+ S N S N+ + + VDL + +A
Sbjct: 470 D--SSPLYIQNPFETSLNISKNVSQSQLQKFVDLARESA 506
>AL353796-1|CAH72262.1| 582|Homo sapiens novel protein protein.
Length = 582
Score = 32.3 bits (70), Expect = 1.5
Identities = 32/99 (32%), Positives = 45/99 (45%)
Frame = -2
Query: 568 NNESLYKLLGGFFSYYGTFDFEENIICPYLGFPIRKKSFDLFLTKFSLYQHNVAAEVCKP 389
N E+L LL FF Y+G F F++N I IR+ E KP
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI------NIRQ-----------------GREQNKP 469
Query: 388 LRLDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAA 272
+PL IQ+PF+ S N S N+ + + VDL + +A
Sbjct: 470 D--SSPLYIQNPFETSLNISKNVSQSQLQKFVDLARESA 506
>AL161651-3|CAI14218.1| 582|Homo sapiens novel protein protein.
Length = 582
Score = 32.3 bits (70), Expect = 1.5
Identities = 32/99 (32%), Positives = 45/99 (45%)
Frame = -2
Query: 568 NNESLYKLLGGFFSYYGTFDFEENIICPYLGFPIRKKSFDLFLTKFSLYQHNVAAEVCKP 389
N E+L LL FF Y+G F F++N I IR+ E KP
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI------NIRQ-----------------GREQNKP 469
Query: 388 LRLDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAA 272
+PL IQ+PF+ S N S N+ + + VDL + +A
Sbjct: 470 D--SSPLYIQNPFETSLNISKNVSQSQLQKFVDLARESA 506
>AK022188-1|BAB13981.1| 582|Homo sapiens protein ( Homo sapiens
cDNA FLJ12126 fis, clone MAMMA1000163. ).
Length = 582
Score = 32.3 bits (70), Expect = 1.5
Identities = 32/99 (32%), Positives = 45/99 (45%)
Frame = -2
Query: 568 NNESLYKLLGGFFSYYGTFDFEENIICPYLGFPIRKKSFDLFLTKFSLYQHNVAAEVCKP 389
N E+L LL FF Y+G F F++N I IR+ E KP
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI------NIRQ-----------------GREQNKP 469
Query: 388 LRLDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAA 272
+PL IQ+PF+ S N S N+ + + VDL + +A
Sbjct: 470 D--SSPLYIQNPFETSLNISKNVSQSQLQKFVDLARESA 506
>AK001348-1|BAA91641.1| 582|Homo sapiens protein ( Homo sapiens
cDNA FLJ10486 fis, clone NT2RP2000205. ).
Length = 582
Score = 32.3 bits (70), Expect = 1.5
Identities = 32/99 (32%), Positives = 45/99 (45%)
Frame = -2
Query: 568 NNESLYKLLGGFFSYYGTFDFEENIICPYLGFPIRKKSFDLFLTKFSLYQHNVAAEVCKP 389
N E+L LL FF Y+G F F++N I IR+ E KP
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI------NIRQ-----------------GREQNKP 469
Query: 388 LRLDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAA 272
+PL IQ+PF+ S N S N+ + + VDL + +A
Sbjct: 470 D--SSPLYIQNPFETSLNISKNVSQSQLQKFVDLARESA 506
>AB194709-1|BAD98252.1| 582|Homo sapiens mitochondrial polyA
polymerase protein.
Length = 582
Score = 32.3 bits (70), Expect = 1.5
Identities = 32/99 (32%), Positives = 45/99 (45%)
Frame = -2
Query: 568 NNESLYKLLGGFFSYYGTFDFEENIICPYLGFPIRKKSFDLFLTKFSLYQHNVAAEVCKP 389
N E+L LL FF Y+G F F++N I IR+ E KP
Sbjct: 433 NTETLELLLKEFFEYFGNFAFDKNSI------NIRQ-----------------GREQNKP 469
Query: 388 LRLDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAA 272
+PL IQ+PF+ S N S N+ + + VDL + +A
Sbjct: 470 D--SSPLYIQNPFETSLNISKNVSQSQLQKFVDLARESA 506
>BC128263-1|AAI28264.1| 874|Homo sapiens terminal uridylyl
transferase 1, U6 snRNA-specific protein.
Length = 874
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -2
Query: 388 LRLDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAA 272
LRL PL +QDPFD S N + N+ ++ R+ + ++AA
Sbjct: 534 LRLG-PLNLQDPFDLSHNVAANVTSRVAGRLQNCCRAAA 571
>BC110910-1|AAI10911.1| 874|Homo sapiens terminal uridylyl
transferase 1, U6 snRNA-specific protein.
Length = 874
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -2
Query: 388 LRLDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAA 272
LRL PL +QDPFD S N + N+ ++ R+ + ++AA
Sbjct: 534 LRLG-PLNLQDPFDLSHNVAANVTSRVAGRLQNCCRAAA 571
>BC005013-1|AAH05013.2| 578|Homo sapiens TUT1 protein protein.
Length = 578
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -2
Query: 388 LRLDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAA 272
LRL PL +QDPFD S N + N+ ++ R+ + ++AA
Sbjct: 238 LRLG-PLNLQDPFDLSHNVAANVTSRVAGRLQNCCRAAA 275
>AK026000-1|BAB15314.1| 874|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22347 fis, clone HRC06188. ).
Length = 874
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -2
Query: 388 LRLDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAA 272
LRL PL +QDPFD S N + N+ ++ R+ + ++AA
Sbjct: 534 LRLG-PLNLQDPFDLSHNVAANVTSRVAGRLQNCCRAAA 571
>AK025920-1|BAB15282.1| 535|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22267 fis, clone HRC03120. ).
Length = 535
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -2
Query: 388 LRLDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAA 272
LRL PL +QDPFD S N + N+ ++ R+ + ++AA
Sbjct: 195 LRLG-PLNLQDPFDLSHNVAANVTSRVAGRLQNCCRAAA 232
>BC125047-1|AAI25048.1| 449|Homo sapiens GPR39 protein protein.
Length = 449
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +1
Query: 433 ILLRISQSFFFLSEILNMDILYFLRNQKFR 522
ILL S++FF+LS ++N +LY + +Q+FR
Sbjct: 320 ILLPFSETFFYLSSVIN-PLLYTVSSQQFR 348
>BC125046-1|AAI25047.1| 453|Homo sapiens GPR39 protein protein.
Length = 453
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +1
Query: 433 ILLRISQSFFFLSEILNMDILYFLRNQKFR 522
ILL S++FF+LS ++N +LY + +Q+FR
Sbjct: 324 ILLPFSETFFYLSSVIN-PLLYTVSSQQFR 352
>AF034633-1|AAC26082.1| 453|Homo sapiens GPR39 protein.
Length = 453
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +1
Query: 433 ILLRISQSFFFLSEILNMDILYFLRNQKFR 522
ILL S++FF+LS ++N +LY + +Q+FR
Sbjct: 324 ILLPFSETFFYLSSVIN-PLLYTVSSQQFR 352
>AC079773-1|AAX93106.1| 167|Homo sapiens unknown protein.
Length = 167
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +1
Query: 433 ILLRISQSFFFLSEILNMDILYFLRNQKFR 522
ILL S++FF+LS ++N +LY + +Q+FR
Sbjct: 38 ILLPFSETFFYLSSVIN-PLLYTVSSQQFR 66
>BC070104-1|AAH70104.1| 707|Homo sapiens KIAA1841 protein.
Length = 707
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 334 CSVN-IYPKLVTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIY 200
C++N I L+TRI DLF KDKK F ++ K E ++
Sbjct: 263 CNMNCINANLLTRIADLFSHNEVDDLKDKKDKFKSKLFCKKIERLF 308
>BC039298-1|AAH39298.1| 572|Homo sapiens KIAA1841 protein protein.
Length = 572
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 334 CSVN-IYPKLVTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIY 200
C++N I L+TRI DLF KDKK F ++ K E ++
Sbjct: 117 CNMNCINANLLTRIADLFSHNEVDDLKDKKDKFKSKLFCKKIERLF 162
>AK131267-1|BAD18445.1| 379|Homo sapiens protein ( Homo sapiens
cDNA FLJ16202 fis, clone CTONG2015596. ).
Length = 379
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 334 CSVN-IYPKLVTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIY 200
C++N I L+TRI DLF KDKK F ++ K E ++
Sbjct: 263 CNMNCINANLLTRIADLFSHNEVDDLKDKKDKFKSKLFCKKIERLF 308
>AB058744-1|BAB47470.1| 523|Homo sapiens KIAA1841 protein protein.
Length = 523
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 334 CSVN-IYPKLVTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIY 200
C++N I L+TRI DLF KDKK F ++ K E ++
Sbjct: 68 CNMNCINANLLTRIADLFSHNEVDDLKDKKDKFKSKLFCKKIERLF 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,902,854
Number of Sequences: 237096
Number of extensions: 1524522
Number of successful extensions: 2961
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2961
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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