Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_H23
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z83104-3|CAB05476.1| 295|Caenorhabditis elegans Hypothetical pr... 31 0.51
AC006769-1|AAF60590.2| 287|Caenorhabditis elegans Hypothetical ... 31 0.68
AC006722-17|ABP57812.1| 141|Caenorhabditis elegans Hypothetical... 31 0.68
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 30 1.6
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 30 1.6
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 30 1.6
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 30 1.6
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 30 1.6
AF039719-7|AAB96748.1| 441|Caenorhabditis elegans Mutator prote... 29 2.1
Z92784-7|CAE54895.1| 808|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z92784-6|CAB07197.1| 805|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81526-9|CAE54892.1| 808|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81526-8|CAB04268.1| 805|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z70038-4|CAA93881.1| 427|Caenorhabditis elegans Hypothetical pr... 28 6.3
U80448-10|AAB37823.1| 482|Caenorhabditis elegans Hypothetical p... 28 6.3
AF025454-7|AAC71154.3| 367|Caenorhabditis elegans Hypothetical ... 27 8.4
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 45.6 bits (103), Expect = 3e-05
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 4/130 (3%)
Frame = -2
Query: 622 MTDYWXTNF---NNNYLHR-TTNNESLYKLLGGFFSYYGTFDFEENIICPYLGFPIRKKS 455
+ D W T+F + L R N ES +LL G+F YY FDF ++ R+
Sbjct: 1220 LVDNWDTSFAQVETSLLQRWPKNKESCAQLLIGYFDYYSRFDFRNFVV------QCRR-- 1271
Query: 454 FDLFLTKFSLYQHNVAAEVCKPLRLDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSA 275
++ L+K PLC++DPFD S N S + K+ I+ +F ++
Sbjct: 1272 -EMILSKMEK-------------EWPRPLCVEDPFDLSHNLSSGVNKKMFVFIMKVFINS 1317
Query: 274 AETFHKDKKP 245
F +K P
Sbjct: 1318 RAVFMSEKPP 1327
>Z83104-3|CAB05476.1| 295|Caenorhabditis elegans Hypothetical
protein F09B12.2 protein.
Length = 295
Score = 31.5 bits (68), Expect = 0.51
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 376 CPIAMVCILQRQHYVDIRKILLRISQSFFFLSEILNMDIL 495
CP+ VCIL+R H+ + + +F++ ++N+ I+
Sbjct: 119 CPVCDVCILRRDHHCSFGAVCVGHFNQRYFVAAVINLFIM 158
>AC006769-1|AAF60590.2| 287|Caenorhabditis elegans Hypothetical
protein Y45G12C.8 protein.
Length = 287
Score = 31.1 bits (67), Expect = 0.68
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 150 TLLCKNFVFLCLYLTS*YIFSVFFCK 227
++L F FL LYL S +FS+F+CK
Sbjct: 9 SILAILFSFLALYLNSFILFSIFYCK 34
>AC006722-17|ABP57812.1| 141|Caenorhabditis elegans Hypothetical
protein Y19D10A.17 protein.
Length = 141
Score = 31.1 bits (67), Expect = 0.68
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 150 TLLCKNFVFLCLYLTS*YIFSVFFCK 227
++L F FL LYL S +FS+F+CK
Sbjct: 9 SILAILFSFLALYLNSFILFSIFYCK 34
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 382 LDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAAE 269
++TP+C+QD + NC N K V ++ + +A E
Sbjct: 906 IETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALE 943
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 382 LDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAAE 269
++TP+C+QD + NC N K V ++ + +A E
Sbjct: 953 IETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALE 990
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical protein
F11A10.1a protein.
Length = 1291
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 382 LDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAAE 269
++TP+C+QD + NC N K V ++ + +A E
Sbjct: 955 IETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALE 992
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 382 LDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAAE 269
++TP+C+QD + NC N K V ++ + +A E
Sbjct: 906 IETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALE 943
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical protein
F11A10.1b protein.
Length = 1289
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 382 LDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAAE 269
++TP+C+QD + NC N K V ++ + +A E
Sbjct: 953 IETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALE 990
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical protein
F11A10.1a protein.
Length = 1291
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 382 LDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAAE 269
++TP+C+QD + NC N K V ++ + +A E
Sbjct: 955 IETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALE 992
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expression
abnormal protein protein.
Length = 1291
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 382 LDTPLCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAAE 269
++TP+C+QD + NC N K V ++ + +A E
Sbjct: 955 IETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALE 992
>AF039719-7|AAB96748.1| 441|Caenorhabditis elegans Mutator protein
2, isoform a protein.
Length = 441
Score = 29.5 bits (63), Expect = 2.1
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = -2
Query: 568 NNESLYKLLGGFFSYYGTFDFEENIICPYLGFPIRKKSFDLFLTKFSLYQHNVAAEVCKP 389
NN L +L F YY F+F+EN Y+G + + + Q+N+
Sbjct: 303 NNAPLARLFIEFLYYYSMFNFKEN----YIG------ARPVMVMDRRTSQNNMVRS---- 348
Query: 388 LRLDTPLCIQDPFD-HSRNCSVNIYPKLVTRIVDLFKSAAETF 263
+ +CIQDPFD H+ +V + + RI D+ +S + F
Sbjct: 349 -STNKEVCIQDPFDEHNPGRTV----RTLNRIKDVMRSTYQKF 386
>Z92784-7|CAE54895.1| 808|Caenorhabditis elegans Hypothetical
protein F31C3.2b protein.
Length = 808
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2
Query: 568 NNESLYKLLGGFFSYYGTFDF 506
N SL +LL GFF YY FDF
Sbjct: 707 NTWSLGELLIGFFQYYNEFDF 727
>Z92784-6|CAB07197.1| 805|Caenorhabditis elegans Hypothetical
protein F31C3.2a protein.
Length = 805
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2
Query: 568 NNESLYKLLGGFFSYYGTFDF 506
N SL +LL GFF YY FDF
Sbjct: 704 NTWSLGELLIGFFQYYNEFDF 724
>Z81526-9|CAE54892.1| 808|Caenorhabditis elegans Hypothetical
protein F31C3.2b protein.
Length = 808
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2
Query: 568 NNESLYKLLGGFFSYYGTFDF 506
N SL +LL GFF YY FDF
Sbjct: 707 NTWSLGELLIGFFQYYNEFDF 727
>Z81526-8|CAB04268.1| 805|Caenorhabditis elegans Hypothetical
protein F31C3.2a protein.
Length = 805
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2
Query: 568 NNESLYKLLGGFFSYYGTFDF 506
N SL +LL GFF YY FDF
Sbjct: 704 NTWSLGELLIGFFQYYNEFDF 724
>Z70038-4|CAA93881.1| 427|Caenorhabditis elegans Hypothetical
protein ZK1067.5 protein.
Length = 427
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/91 (26%), Positives = 38/91 (41%)
Frame = +3
Query: 201 YIFSVFFCKISLRKLGFLSL*NVSAADLNRSTILVTNLGYILTEQFLE*SNGSCIHKGVS 380
++ S +FC +SL +GF L V + +I+ +G ILT ++ S I K S
Sbjct: 320 FLDSFYFCLVSLLTVGFGDLHPVGTVEYMLCSIVFIFIGLILTTLAVDVSGSVGIAKMHS 379
Query: 381 NRNGLHTSAATLC*YKENFVKNKSKLFFLIG 473
G K+ VK + L+G
Sbjct: 380 IGRGFDAMKMLNALRKKETVKKFQIMLELMG 410
>U80448-10|AAB37823.1| 482|Caenorhabditis elegans Hypothetical
protein F59A3.9 protein.
Length = 482
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 568 NNESLYKLLGGFFSYYGTFDFEENIICPYLGFPIRKK 458
N SL L GF YY F+F+ N I G ++KK
Sbjct: 285 NTSSLAVLFIGFMKYYSEFNFKWNWISIKHGNVLKKK 321
>AF025454-7|AAC71154.3| 367|Caenorhabditis elegans Hypothetical
protein F34D6.4 protein.
Length = 367
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +2
Query: 137 LNLLYFIM*KLRLSMFIFNFLIYIFRIFLQNFSQEIRFFI 256
L + Y ++ ++S F + Y+F++++QN I F +
Sbjct: 31 LRVTYQLLRPSQISFLFFFSIFYVFKMYVQNVKDHITFAV 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,099,469
Number of Sequences: 27780
Number of extensions: 279473
Number of successful extensions: 869
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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