Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_H21
         (719 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0103 + 6797830-6798433,6799412-6799480,6799573-6799664,679...    29   3.7  
04_04_1177 - 31497288-31497647,31497782-31497932,31498017-314982...    28   8.6  

>02_02_0103 +
           6797830-6798433,6799412-6799480,6799573-6799664,
           6799968-6800002,6800306-6800470,6800561-6800657,
           6800915-6801031
          Length = 392

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 567 PSDPRHHSNPHIRERLRGLRS 629
           PS P  H +PH R RLRG R+
Sbjct: 38  PSSPTPHPHPHRRLRLRGARA 58


>04_04_1177 -
           31497288-31497647,31497782-31497932,31498017-31498254,
           31498373-31498583,31498674-31498780,31498877-31498905,
           31499764-31499930
          Length = 420

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = -1

Query: 716 TTSVSRALPASTVAPSEPFSRSETPT 639
           TT  S     ST   +EPFS SETPT
Sbjct: 391 TTRSSNMRSFSTTDETEPFSSSETPT 416


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,192,441
Number of Sequences: 37544
Number of extensions: 300419
Number of successful extensions: 754
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)