Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_H18
         (346 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93375-2|CAB07564.2|  359|Caenorhabditis elegans Hypothetical pr...    29   0.68 
AF078783-1|AAK82900.1|  382|Caenorhabditis elegans Hypothetical ...    29   1.2  
Z68004-5|CAA91986.1|  114|Caenorhabditis elegans Hypothetical pr...    27   2.7  
AF078782-1|AAC26913.1|  361|Caenorhabditis elegans Hypothetical ...    26   6.3  

>Z93375-2|CAB07564.2|  359|Caenorhabditis elegans Hypothetical
           protein C38C6.4 protein.
          Length = 359

 Score = 29.5 bits (63), Expect = 0.68
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 169 LKLF-ENFRYIHFSLIYYLILWELALVLSFIITFTSVFD*YHGLKTC 32
           +K F + +  I  S  YYL ++ + + L FI+ F  + + Y  +KTC
Sbjct: 16  IKYFNKTYSIIEGSYNYYLFVFYIQIALIFIVLFYYLLNVYIDIKTC 62


>AF078783-1|AAK82900.1|  382|Caenorhabditis elegans Hypothetical
           protein H10E21.2 protein.
          Length = 382

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -3

Query: 131 FDLLSHIMGVGFSSFIYYYFHISF*LIPWIENLRXSNL 18
           F++L+ + G GF+S  Y YF++    +P I   R S++
Sbjct: 153 FNILAFVFGYGFTSAAYMYFYLR---VPMILKRRYSSI 187


>Z68004-5|CAA91986.1|  114|Caenorhabditis elegans Hypothetical
           protein F47B10.6 protein.
          Length = 114

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 10/27 (37%), Positives = 21/27 (77%)
 Frame = +2

Query: 203 KEFINSQRRNVDSYVFLFVNLHSLKLH 283
           +EF+ SQR+ +++Y+ + +N HS+ L+
Sbjct: 79  EEFVVSQRKQLNAYINI-INFHSISLY 104


>AF078782-1|AAC26913.1|  361|Caenorhabditis elegans Hypothetical
           protein H34P18.1 protein.
          Length = 361

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 282 CNFKECKFTNKNT*LSTFLRCELMNSLTFTLTKKF 178
           C F +  F  +NT +     C LM  L+FTL KKF
Sbjct: 203 CLFLKIYFIARNT-IFPIAPCVLMLILSFTLLKKF 236


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,647,929
Number of Sequences: 27780
Number of extensions: 110161
Number of successful extensions: 258
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)