Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_H17
         (804 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-depend...   156   9e-40
AY800250-1|AAV68043.1|   97|Anopheles gambiae thioredoxin depend...    37   8e-04
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   0.68 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.2  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    25   3.6  

>AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-dependent
           peroxidase protein.
          Length = 96

 Score =  156 bits (378), Expect = 9e-40
 Identities = 70/94 (74%), Positives = 79/94 (84%)
 Frame = -3

Query: 418 LAWINTPRKDGGLGKMEIPLLADYKKQISKDYDVLLDDGFALRGLFIIDRNGTLRHMSVN 239
           LAWINTPRK GGLGK+E PLLAD  K+IS DY VLL DG +LRGLFIID  G +R +++N
Sbjct: 1   LAWINTPRKAGGLGKLEYPLLADLTKRISADYGVLLPDGISLRGLFIIDPAGVVRQITIN 60

Query: 238 DLPVGRSVDETLRLVKAFQFADKHGEVCPAGWNP 137
           DLPVGRSVDETLRL+KAFQF +KHGEVCPA W P
Sbjct: 61  DLPVGRSVDETLRLIKAFQFVEKHGEVCPANWEP 94


>AY800250-1|AAV68043.1|   97|Anopheles gambiae thioredoxin dependent
           peroxidase protein.
          Length = 97

 Score = 36.7 bits (81), Expect = 8e-04
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = -3

Query: 292 RGLFIIDRNGTLRHMSVNDLPVGRSVDETLRLVKAFQFADKHGEVCPAGWNP 137
           R +F+ID    LR   +     GR+  E LR + + Q  DK     PA W P
Sbjct: 4   RAVFVIDAGKKLRLSILYPATTGRNFAEILRTIDSMQLTDKRRVATPADWMP 55


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 27.1 bits (57), Expect = 0.68
 Identities = 17/39 (43%), Positives = 18/39 (46%)
 Frame = -2

Query: 245 GERSARGPLRGRDAPPGQGLPVRRQARRGVPGRLEPGHQ 129
           GE    G LRG D  PG   P   +   GVPG   PG Q
Sbjct: 317 GEPGVPG-LRGNDGIPGLEGPSGPKGDAGVPGYGRPGPQ 354


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 203 PPGQGLPVRRQARRG-VPGRLEPGHQRRHHQAE 108
           PPG  +P+R Q   G VPG ++PG Q R   A+
Sbjct: 221 PPGVPMPMRPQMPPGAVPG-MQPGMQPRPPSAQ 252


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -1

Query: 642 RSLLQTSVRQQLSMESSINLNFQISRENT*FCSSIHWISHLYVR 511
           R+L    +   LS+ +S      +SR N    S  HWI H   R
Sbjct: 217 RNLFDHLLPDNLSLFASFVTQHYVSRRNRIIPSLEHWIPHCGAR 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,684
Number of Sequences: 2352
Number of extensions: 16206
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)