Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_H08
(391 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p pro... 94 5e-20
AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB... 94 5e-20
AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA... 94 5e-20
U03289-1|AAA03464.1| 113|Drosophila melanogaster protein ( Dros... 85 4e-17
AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p pro... 27 6.6
AF225958-1|AAF35374.1| 1215|Drosophila melanogaster unknown prot... 27 6.6
AE014134-2656|AAG22436.2| 379|Drosophila melanogaster CG4793-PB... 27 6.6
AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC... 27 6.6
AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC... 27 6.6
AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB... 27 6.6
AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA... 27 6.6
>AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p
protein.
Length = 117
Score = 94.3 bits (224), Expect = 5e-20
Identities = 49/80 (61%), Positives = 52/80 (65%)
Frame = -3
Query: 353 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXKLNNQVLFDKPTYEKLYKE 174
MPPKKDAK+SAKQPQ KLNNQVLFDK TYEKLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 173 VPQYKLITPAVVSERLKVRG 114
VP YKLITP+VVSERLK+RG
Sbjct: 61 VPAYKLITPSVVSERLKIRG 80
Score = 64.5 bits (150), Expect = 5e-11
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = -1
Query: 109 LARRALIELREKGLIKQVVQHHGQVIYTRATQG 11
LA+RALIELREKGLIKQVVQHH QVIYTRAT+G
Sbjct: 82 LAKRALIELREKGLIKQVVQHHSQVIYTRATKG 114
>AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB,
isoform B protein.
Length = 117
Score = 94.3 bits (224), Expect = 5e-20
Identities = 49/80 (61%), Positives = 52/80 (65%)
Frame = -3
Query: 353 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXKLNNQVLFDKPTYEKLYKE 174
MPPKKDAK+SAKQPQ KLNNQVLFDK TYEKLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 173 VPQYKLITPAVVSERLKVRG 114
VP YKLITP+VVSERLK+RG
Sbjct: 61 VPAYKLITPSVVSERLKIRG 80
Score = 64.5 bits (150), Expect = 5e-11
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = -1
Query: 109 LARRALIELREKGLIKQVVQHHGQVIYTRATQG 11
LA+RALIELREKGLIKQVVQHH QVIYTRAT+G
Sbjct: 82 LAKRALIELREKGLIKQVVQHHSQVIYTRATKG 114
>AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA,
isoform A protein.
Length = 117
Score = 94.3 bits (224), Expect = 5e-20
Identities = 49/80 (61%), Positives = 52/80 (65%)
Frame = -3
Query: 353 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXKLNNQVLFDKPTYEKLYKE 174
MPPKKDAK+SAKQPQ KLNNQVLFDK TYEKLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 173 VPQYKLITPAVVSERLKVRG 114
VP YKLITP+VVSERLK+RG
Sbjct: 61 VPAYKLITPSVVSERLKIRG 80
Score = 64.5 bits (150), Expect = 5e-11
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = -1
Query: 109 LARRALIELREKGLIKQVVQHHGQVIYTRATQG 11
LA+RALIELREKGLIKQVVQHH QVIYTRAT+G
Sbjct: 82 LAKRALIELREKGLIKQVVQHHSQVIYTRATKG 114
>U03289-1|AAA03464.1| 113|Drosophila melanogaster protein (
Drosophila melanogasterSevelin ribosomal protein homolog
gene, partial cds. ).
Length = 113
Score = 84.6 bits (200), Expect = 4e-17
Identities = 45/76 (59%), Positives = 48/76 (63%)
Frame = -3
Query: 341 KDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXKLNNQVLFDKPTYEKLYKEVPQY 162
KDAK+SAKQPQ KLNNQVLFDK TYEKLYKEVP Y
Sbjct: 1 KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 60
Query: 161 KLITPAVVSERLKVRG 114
KLITP+VVSERLK+RG
Sbjct: 61 KLITPSVVSERLKIRG 76
Score = 62.1 bits (144), Expect = 2e-10
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = -1
Query: 109 LARRALIELREKGLIKQVVQHHGQVIYTRATQG 11
L +RALIELREKGLIKQVVQHH QVIYTRAT+G
Sbjct: 78 LDKRALIELREKGLIKQVVQHHSQVIYTRATKG 110
>AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p
protein.
Length = 607
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 322 PNSLKKHRRRRKDPVAAKPRRRSGP 248
P+S + R R+ P++ PRRRS P
Sbjct: 128 PHSRSRSRLRKSPPLSPPPRRRSPP 152
>AF225958-1|AAF35374.1| 1215|Drosophila melanogaster unknown protein.
Length = 1215
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -3
Query: 212 LFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGXPGEKSTHRA 84
L ++P+ KLY + K++ P ++ R+ KS H+A
Sbjct: 1170 LEEEPSLVKLYGDALAQKMVRPGSIAHRIAPHHFNHSKSVHKA 1212
>AE014134-2656|AAG22436.2| 379|Drosophila melanogaster CG4793-PB,
isoform B protein.
Length = 379
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 205 SNNTWLFNLSRTFPLDHFF-FLALPPPDPSF 294
+NN L L+R LDH + LPPP+ +F
Sbjct: 189 ANNAALLFLARPLKLDHHIGLICLPPPNRNF 219
>AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC,
isoform C protein.
Length = 1022
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 205 SNNTWLFNLSRTFPLDHFF-FLALPPPDPSF 294
+NN L L+R LDH + LPPP+ +F
Sbjct: 189 ANNAALLFLARPLKLDHHIGLICLPPPNRNF 219
>AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC,
isoform C protein.
Length = 567
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 322 PNSLKKHRRRRKDPVAAKPRRRSGP 248
P+S + R R+ P++ PRRRS P
Sbjct: 88 PHSRSRSRLRKSPPLSPPPRRRSPP 112
>AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB,
isoform B protein.
Length = 607
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 322 PNSLKKHRRRRKDPVAAKPRRRSGP 248
P+S + R R+ P++ PRRRS P
Sbjct: 128 PHSRSRSRLRKSPPLSPPPRRRSPP 152
>AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA,
isoform A protein.
Length = 607
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 322 PNSLKKHRRRRKDPVAAKPRRRSGP 248
P+S + R R+ P++ PRRRS P
Sbjct: 128 PHSRSRSRLRKSPPLSPPPRRRSPP 152
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,640,059
Number of Sequences: 53049
Number of extensions: 383818
Number of successful extensions: 1171
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1086986940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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