Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_G17
         (356 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC071966-1|AAH71966.1|  221|Homo sapiens FAM60A protein protein.       28   9.8  
BC004462-1|AAH04462.1|   73|Homo sapiens FAM60A protein protein.       28   9.8  
BC000024-1|AAH00024.1|  221|Homo sapiens family with sequence si...    28   9.8  
AY598323-1|AAT06734.1|  221|Homo sapiens L4 protein.                   28   9.8  
AK026932-1|BAB15592.1|  221|Homo sapiens protein ( Homo sapiens ...    28   9.8  
AF087885-1|AAP97184.1|  221|Homo sapiens Tera protein.                 28   9.8  

>BC071966-1|AAH71966.1|  221|Homo sapiens FAM60A protein protein.
          Length = 221

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 102 NVTPLLNFYDSLYYKRQSQRCGM 170
           N TP+ +F D  Y+KRQ   CG+
Sbjct: 154 NRTPVFSFLDLTYWKRQKICCGI 176


>BC004462-1|AAH04462.1|   73|Homo sapiens FAM60A protein protein.
          Length = 73

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 102 NVTPLLNFYDSLYYKRQSQRCGM 170
           N TP+ +F D  Y+KRQ   CG+
Sbjct: 6   NRTPVFSFLDLTYWKRQKICCGI 28


>BC000024-1|AAH00024.1|  221|Homo sapiens family with sequence
           similarity 60, member A protein.
          Length = 221

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 102 NVTPLLNFYDSLYYKRQSQRCGM 170
           N TP+ +F D  Y+KRQ   CG+
Sbjct: 154 NRTPVFSFLDLTYWKRQKICCGI 176


>AY598323-1|AAT06734.1|  221|Homo sapiens L4 protein.
          Length = 221

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 102 NVTPLLNFYDSLYYKRQSQRCGM 170
           N TP+ +F D  Y+KRQ   CG+
Sbjct: 154 NRTPVFSFLDLTYWKRQKICCGI 176


>AK026932-1|BAB15592.1|  221|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23279 fis, clone HEP06870. ).
          Length = 221

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 102 NVTPLLNFYDSLYYKRQSQRCGM 170
           N TP+ +F D  Y+KRQ   CG+
Sbjct: 154 NRTPVFSFLDLTYWKRQKICCGI 176


>AF087885-1|AAP97184.1|  221|Homo sapiens Tera protein.
          Length = 221

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 102 NVTPLLNFYDSLYYKRQSQRCGM 170
           N TP+ +F D  Y+KRQ   CG+
Sbjct: 154 NRTPVFSFLDLTYWKRQKICCGI 176


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,173,341
Number of Sequences: 237096
Number of extensions: 854102
Number of successful extensions: 1591
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1591
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)