Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_G17
(356 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73906-7|CAA98119.2| 428|Caenorhabditis elegans Hypothetical pr... 28 1.7
AF022982-5|AAB69936.2| 799|Caenorhabditis elegans Hypothetical ... 27 2.9
Z93375-2|CAB07564.2| 359|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z75554-11|CAA99961.1| 301|Caenorhabditis elegans Hypothetical p... 27 5.1
U80030-8|AAG24166.2| 375|Caenorhabditis elegans Serpentine rece... 27 5.1
Z83232-4|CAB05756.2| 891|Caenorhabditis elegans Hypothetical pr... 26 6.7
AC024214-15|AAM97983.1| 544|Caenorhabditis elegans Hypothetical... 26 6.7
AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical... 26 6.7
U88310-3|AAB42337.1| 608|Caenorhabditis elegans Hypothetical pr... 26 8.9
U88310-2|AAB42338.2| 635|Caenorhabditis elegans Hypothetical pr... 26 8.9
AC024817-2|AAU87810.1| 520|Caenorhabditis elegans Hypothetical ... 26 8.9
>Z73906-7|CAA98119.2| 428|Caenorhabditis elegans Hypothetical
protein D2030.7 protein.
Length = 428
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 216 CDNDKTQLNYSNILLLFECLQCMHDFVTEVSPLILLHR 329
C N+ L++ IL E + D V EV P I++HR
Sbjct: 48 CPNNDCNLSFVLILQKTEFFRLKRDVVFEVRPTIVVHR 85
>AF022982-5|AAB69936.2| 799|Caenorhabditis elegans Hypothetical
protein T23B12.4 protein.
Length = 799
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +1
Query: 214 IVIMIKHNLTIQIYYYFLNVYNACMTLLQKFRHLFYYIGAEQCH 345
+ + HNL I +YF + + + +F +++++IG+ Q H
Sbjct: 553 VATFVFHNLLAIINHYFELGFRMDLYVPYEFPYIYWFIGSVQAH 596
>Z93375-2|CAB07564.2| 359|Caenorhabditis elegans Hypothetical
protein C38C6.4 protein.
Length = 359
Score = 26.6 bits (56), Expect = 5.1
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +1
Query: 193 SLHYEIFIVIMIKHNLTIQIYYYFLNVY---NACM--TLLQKFRHLFY 321
S +Y +F+ + + I ++YY LNVY C T QK H Y
Sbjct: 29 SYNYYLFVFYIQIALIFIVLFYYLLNVYIDIKTCQFSTNTQKIHHAIY 76
>Z75554-11|CAA99961.1| 301|Caenorhabditis elegans Hypothetical
protein ZC455.8a protein.
Length = 301
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 202 YEIFIVIMIKHNLTIQIYYYFLNVYNACMTLLQKFRHLF 318
++I ++ I ++LT+ IYY+ L V +L +++ LF
Sbjct: 48 FKIRFIVDICYSLTVSIYYFSLIVSYISPFILFQYKSLF 86
>U80030-8|AAG24166.2| 375|Caenorhabditis elegans Serpentine
receptor, class w protein112 protein.
Length = 375
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 174 NTVLILIFTL*DFYCDNDKTQLNYSNILLLFECLQCMHDFVTEVSPLILL 323
N L ++ L D Y K Y N+++L CL C+ D+ S + L
Sbjct: 86 NIHLKIVLILTDIYPCYSKNL--YHNLIILDNCLYCLQDYTRRCSTWLSL 133
>Z83232-4|CAB05756.2| 891|Caenorhabditis elegans Hypothetical
protein K04B12.3 protein.
Length = 891
Score = 26.2 bits (55), Expect = 6.7
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +3
Query: 222 NDKTQLNYSNILLLFECLQCMHD 290
++K +++ N++ L CLQC+ D
Sbjct: 301 SEKNEISLENVIELMNCLQCVLD 323
>AC024214-15|AAM97983.1| 544|Caenorhabditis elegans Hypothetical
protein Y77E11A.12a protein.
Length = 544
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 235 NLTIQIYYYFLNVYNACMTLLQKF 306
N+ I +YFL VY C TLL F
Sbjct: 216 NVKITRVFYFLTVYWTCWTLLFAF 239
>AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical
protein Y77E11A.12b protein.
Length = 644
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 235 NLTIQIYYYFLNVYNACMTLLQKF 306
N+ I +YFL VY C TLL F
Sbjct: 316 NVKITRVFYFLTVYWTCWTLLFAF 339
>U88310-3|AAB42337.1| 608|Caenorhabditis elegans Hypothetical
protein C24G7.1 protein.
Length = 608
Score = 25.8 bits (54), Expect = 8.9
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -1
Query: 179 SICHTTPLRLPFIIQ*----VIEIEQWSYIWRWFTAVTFV*ASS*LNLL 45
+IC+ TP+R F+ + I +YI WFT V + SS LL
Sbjct: 137 TICNFTPIRKTFVNEMNKTGQISPNMINYIMHWFTEVPILIGSSNWQLL 185
>U88310-2|AAB42338.2| 635|Caenorhabditis elegans Hypothetical
protein C24G7.2 protein.
Length = 635
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 63 AGSDKGHCCKPPPNVTPLLNF 125
AGS G PPP+ P NF
Sbjct: 26 AGSSSGESSTPPPSFVPKCNF 46
>AC024817-2|AAU87810.1| 520|Caenorhabditis elegans Hypothetical
protein Y54G2A.38 protein.
Length = 520
Score = 25.8 bits (54), Expect = 8.9
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 199 HYEIFIVIMIKHNLTIQIYYYFLN 270
+++ F+V ++ N T I++YF+N
Sbjct: 332 YFQYFMVTLMSLNRTTSIFFYFVN 355
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,658,547
Number of Sequences: 27780
Number of extensions: 141296
Number of successful extensions: 335
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 335
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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