Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_G13
(639 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0158 - 27079262-27079346,27079662-27079750,27080540-270806... 105 4e-23
05_01_0273 + 2115257-2115589,2115706-2115766,2115876-2115970,211... 102 3e-22
05_07_0145 + 28012268-28012624,28012734-28012794,28013758-280138... 99 1e-21
01_02_0039 - 10490522-10490606,10490674-10490810,10491107-104912... 84 8e-17
01_05_0795 + 25287449-25287967,25288078-25288138,25288640-252887... 71 8e-13
11_01_0028 - 215821-215880,216114-216284 52 5e-07
01_04_0138 + 16554175-16554822 32 0.33
01_06_0039 + 25857805-25858894,25858997-25859345,25860019-258601... 31 0.77
03_02_0778 - 11123820-11124242,11125196-11125201 30 1.3
09_06_0016 - 20240358-20240797,20241040-20241131,20241132-202412... 30 1.8
09_04_0210 + 15644151-15644609 30 1.8
10_07_0104 - 12907816-12908301 29 2.4
05_07_0198 - 28359092-28359457,28359574-28359729,28359844-283600... 29 2.4
03_06_0222 + 32466379-32466741,32466849-32466948,32467443-324675... 29 2.4
12_02_0913 + 24246217-24247557 29 3.1
01_06_0154 - 27049218-27049517,27049679-27050107 29 3.1
05_06_0170 - 26124178-26124670,26124699-26124703 29 4.1
05_04_0125 - 18241542-18242129 29 4.1
10_06_0145 + 11215895-11216860 28 5.4
10_06_0030 - 9834515-9834608,9834784-9835277 28 5.4
06_01_0754 - 5644310-5646292 28 5.4
01_06_1487 - 37715421-37715942 28 5.4
01_06_0963 + 33441731-33442096,33442175-33442270 28 5.4
01_06_0457 - 29524544-29525962,29526518-29526606,29526841-295268... 28 5.4
01_01_1005 + 7968862-7969755 28 5.4
04_04_1577 + 34554819-34554995,34555672-34555754,34555906-345562... 28 7.2
07_01_0432 + 3290546-3291911,3291972-3291988 27 9.5
06_03_0405 - 20464701-20466287 27 9.5
05_07_0330 - 29318549-29318895,29320084-29320189,29320287-293206... 27 9.5
05_03_0118 - 8586731-8587220,8587331-8587846,8588842-8588906,858... 27 9.5
04_04_0555 - 26210346-26211458,26211530-26211719,26211826-262119... 27 9.5
01_06_1069 + 34275823-34276167 27 9.5
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 27 9.5
>01_06_0158 -
27079262-27079346,27079662-27079750,27080540-27080659,
27080738-27080894,27081167-27081231,27081323-27081436,
27082109-27082178,27082412-27082642,27082963-27083039,
27083143-27083237,27084514-27084574,27084678-27085073
Length = 519
Score = 105 bits (251), Expect = 4e-23
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = -1
Query: 363 GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPL 184
G+ VDCS + +P + FTI GN F L+ Y+L+V + T C+SGF A+D+P P GPL
Sbjct: 432 GESSVDCSSLASMPDIAFTIGGNKFVLKPEQYILKVGEGTATQCISGFTAMDIPPPRGPL 491
Query: 183 WILGDVFIGKYYTEFDAGNRQLGF 112
WILGDVF+G Y+T FD GN ++GF
Sbjct: 492 WILGDVFMGAYHTVFDYGNLKVGF 515
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -1
Query: 576 DPAHYRGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTG-TSLIAGPSKEVEA 400
DP HY+G+ VP+ R YW+ +D + C+ CS T+ + +
Sbjct: 258 DPNHYKGNHTYVPVTRKGYWQ--VDLILKLVGILCSWVCSNSRFWNFTAYWSHGMAIITQ 315
Query: 399 LNAAVGATAI 370
+N +GAT +
Sbjct: 316 INEKIGATGV 325
>05_01_0273 +
2115257-2115589,2115706-2115766,2115876-2115970,
2116072-2116184,2116278-2116551,2116923-2117036,
2117169-2117233,2117325-2117466,2117547-2117666,
2118153-2118241,2118349-2118433
Length = 496
Score = 102 bits (244), Expect = 3e-22
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = -1
Query: 363 GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPL 184
G+ V C I +P + FTIA F L Y++++ Q G TVC+SGFMA D+P P GPL
Sbjct: 409 GESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPL 468
Query: 183 WILGDVFIGKYYTEFDAGNRQLGF 112
WILGDVF+G Y+T FD G ++GF
Sbjct: 469 WILGDVFMGAYHTVFDFGKDRIGF 492
Score = 88.6 bits (210), Expect = 4e-18
Identities = 42/92 (45%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Frame = -1
Query: 639 SXYLNRDPGATTXXXXXXXGSDPAHYRGDLVRVPLLRDTYWEFHMDSVNVN--ASRFCAQ 466
S +LNRDP A++ G DP HY+GD VP+ R YW+F+M + ++ ++ FCA+
Sbjct: 216 SFWLNRDPDASSGGELVFGGMDPKHYKGDHTYVPVSRKGYWQFNMGDLLIDGHSTGFCAK 275
Query: 465 GCSAIADTGTSLIAGPSKEVEALNAAVGATAI 370
GC+AI D+GTSL+AGP+ V +N A+GA I
Sbjct: 276 GCAAIVDSGTSLLAGPTAIVAQVNHAIGAEGI 307
>05_07_0145 +
28012268-28012624,28012734-28012794,28013758-28013852,
28013944-28014056,28014436-28014604,28014677-28014716,
28014797-28014861,28015485-28015598,28015687-28015751,
28015927-28016083,28016167-28016286,28016447-28016535,
28016631-28016715
Length = 509
Score = 99 bits (238), Expect = 1e-21
Identities = 40/84 (47%), Positives = 57/84 (67%)
Frame = -1
Query: 363 GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKPMGPL 184
G+ VDC + +P ++FTI G F L+ +Y+L+V + C+SGF A+D+P P GPL
Sbjct: 422 GESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPL 481
Query: 183 WILGDVFIGKYYTEFDAGNRQLGF 112
WILGDVF+G Y+T FD G ++GF
Sbjct: 482 WILGDVFMGAYHTVFDYGKMRVGF 505
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Frame = -1
Query: 576 DPAHYRGDLVRVPLLRDTYWEFHMDSVNVNASR--FCAQGCSAIADTGTSLIAGPSKEVE 403
DP+HY+G+ VP+ + YW+F M V + FCA GCSAIAD+GTSL+AGP+ +
Sbjct: 245 DPSHYKGNHTYVPVSQKGYWQFEMGDVLIGGKTTGFCASGCSAIADSGTSLLAGPTAIIT 304
Query: 402 ALNAAVGATAI 370
+N +GAT +
Sbjct: 305 EINEKIGATGV 315
>01_02_0039 -
10490522-10490606,10490674-10490810,10491107-10491248,
10491355-10491419,10491528-10491641,10491846-10492119,
10492215-10492327,10492405-10492499,10492602-10492662,
10492774-10493103
Length = 471
Score = 84.2 bits (199), Expect = 8e-17
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = -1
Query: 639 SXYLNRDPGATTXXXXXXXGSDPAHYRGDLVRVPLLRDTYWEFHMDSVNVN--ASRFCAQ 466
S +LNRDP A T G DP HY+G VP+ R YW+F M + ++ ++ FC+
Sbjct: 215 SFWLNRDPDAPTGGELIFGGVDPNHYKGSHTYVPVTRKGYWQFEMGDLLIDDYSTGFCSG 274
Query: 465 GCSAIADTGTSLIAGPSKEVEALNAAVGATAI 370
GC+AIAD+GTSL+ GP+ V +N A+GA I
Sbjct: 275 GCAAIADSGTSLLGGPTTIVAQINHAIGAEGI 306
Score = 64.5 bits (150), Expect = 7e-11
Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 16/71 (22%)
Frame = -1
Query: 276 NDYVLRVAQFGHTVCLSGFMALDVPKPMGPLW----------------ILGDVFIGKYYT 145
+ YV+++ Q G TVC+SGFMA DVP P GPLW ILGDVF+ Y+T
Sbjct: 397 DQYVVKLEQQGQTVCISGFMAFDVPPPRGPLWYTNYTVIKKRELHVVRILGDVFMAAYHT 456
Query: 144 EFDAGNRQLGF 112
FD G ++GF
Sbjct: 457 VFDFGKNRIGF 467
>01_05_0795 +
25287449-25287967,25288078-25288138,25288640-25288734,
25288827-25288939,25289480-25289648,25289777-25289816,
25289906-25289970,25290150-25290263,25290398-25290462,
25290572-25290725,25290798-25290914,25292489-25292545
Length = 522
Score = 70.9 bits (166), Expect = 8e-13
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = -1
Query: 639 SXYLNRDPGATTXXXXXXXGSDPAHYRGDLVRVPLLRDTYWEFHMDS--VNVNASRFCAQ 466
S +LNR+ G+D +HY+GD + R YW+F M + ++ C
Sbjct: 278 SFWLNRNANDINGGEIVFGGADESHYKGDHTYTRVTRKAYWQFEMGDFLIGGRSTGICVD 337
Query: 465 GCSAIADTGTSLIAGPSKEVEALNAAVGATAIA 367
GC+ IAD+GTSLIAGP + ++A +GAT +A
Sbjct: 338 GCAVIADSGTSLIAGPIAAIAQIHAHIGATGVA 370
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -1
Query: 411 EVEALNAAVGATAIAFGQYVVDCSLIPHLPRVTFTIAGNDFTL 283
++E N G G YV DC I HLP V F+I G F L
Sbjct: 459 KLEYANQLCGNMPSPVGSYV-DCRHIGHLPNVAFSIGGRAFEL 500
>11_01_0028 - 215821-215880,216114-216284
Length = 76
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -1
Query: 576 DPAHYRGDLVRVPLLRDTYWEFHMDSV--NVNASRFCAQGCSAIADTGTSLIAGPSKEVE 403
DP H++GD V + R YW+F+ + + +++ F A+GC+AI D+ TSL+ P+ V
Sbjct: 2 DPKHFKGDHTYVHVSRKGYWQFNTRDLLTDGHSTGFYAKGCAAIVDSRTSLLTDPTAIVA 61
Query: 402 ALNAAVGATAI 370
+N A A I
Sbjct: 62 QVNHATEAEGI 72
>01_04_0138 + 16554175-16554822
Length = 215
Score = 32.3 bits (70), Expect = 0.33
Identities = 39/124 (31%), Positives = 47/124 (37%), Gaps = 9/124 (7%)
Frame = +1
Query: 100 HGGREPELAVPRVELRVVLADE-HV---PQDPQRAHGLRHVQRHEAGQ-----AHRVPEL 252
HG P+ P LR +A H P PQRA H QR AG A R
Sbjct: 13 HGMDGPDRPKPIGRLRRAVAGHGHSRGWPDRPQRAAARSHQQRRGAGGTGSSGAQRGKRR 72
Query: 253 CHPEHVVVALEREVVPGDGKGDSRQVRYEAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQ 432
E V E+ G G G+S + R AA+H RG+ RR G
Sbjct: 73 EETEAVREREVAELTEGHGDGESSRRREAAALHRSTMR---RGSRRRKAAIGRRTGKSGT 129
Query: 433 RRAR 444
RR+R
Sbjct: 130 RRSR 133
>01_06_0039 +
25857805-25858894,25858997-25859345,25860019-25860104,
25860242-25860399,25861489-25861565,25861656-25861722
Length = 608
Score = 31.1 bits (67), Expect = 0.77
Identities = 29/111 (26%), Positives = 39/111 (35%), Gaps = 4/111 (3%)
Frame = +1
Query: 160 DEHVPQDPQRAHGLRHVQRHEAGQAHRVPELCHPEHVVVALEREVVPGDGKGDSRQVRYE 339
DEH + P+ H+A + H V V G G G + V +
Sbjct: 286 DEHSARPPKPPATTTGALNHDAKELHMFVWSSSASPVSEVSGLPVFSGGGGGGALDVGAK 345
Query: 340 AAVHDV----LPEGDGRGAHRRVEGFHLLGGPGDQRRARVGDGRAALGTEA 480
+H V LP+ +G G G LGG G G G+ G EA
Sbjct: 346 E-IHMVIPADLPQNNGSGKEHEEYGAVALGGGGGGENFSFGGGKTVDGAEA 395
>03_02_0778 - 11123820-11124242,11125196-11125201
Length = 142
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 189 GPWASARPAP*SRTGTPCARI 251
GPWA+ARP P G PC +
Sbjct: 9 GPWAAARPEPPPPKGRPCGPV 29
>09_06_0016 -
20240358-20240797,20241040-20241131,20241132-20241250,
20241398-20241561,20241664-20241757,20242048-20242080,
20242361-20242478,20242712-20242812,20242882-20242962,
20243138-20243335,20243411-20243545,20243662-20243667,
20243727-20243805,20243845-20243896,20244328-20244388,
20244475-20244532,20245137-20245225,20246305-20246799
Length = 804
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Frame = +1
Query: 157 ADEHVPQDPQRAHGLRHVQRHEAGQAHRVPELCHPEHVVVALEREVVPGDGKGDSRQV-- 330
A E + +RAH RH H+A + H+ H H V+ + + P + V
Sbjct: 684 AQERARRRHKRAHSHRHSHHHDAHKRHKTELAGHRRHHVLHIHDDDDPVAAAAAAEHVIL 743
Query: 331 ----RYEAAVHDVLPEGDGRGAHRRVEG 402
R+EAA+ +G HRR G
Sbjct: 744 RRHGRHEAALGVQHRDGLKLNKHRRHGG 771
>09_04_0210 + 15644151-15644609
Length = 152
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -3
Query: 307 HRRERLHARGQRLRAPGGTIRAHGVPVRLHGAGRAEAHGPA 185
H+ ER A+ R R +RAHG P GAG A PA
Sbjct: 56 HKYERSLAK--RRREIAAALRAHGAPPAADGAGAARYSSPA 94
>10_07_0104 - 12907816-12908301
Length = 161
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 257 WHNSGTRCACPASWRWTCRSPWARCGS 177
W S + C CPA+ RW+ R AR S
Sbjct: 124 WRRSASGCRCPAARRWSGRWSAARARS 150
>05_07_0198 -
28359092-28359457,28359574-28359729,28359844-28360011,
28360082-28360206,28360288-28360405,28360491-28360718,
28360959-28361099,28361433-28361498,28361770-28361862,
28361965-28362225
Length = 573
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +2
Query: 362 PKAMAVAPTAALRASTSLEGPAISDVPVSAMAEQPWAQKRLALT 493
PK +A A AA +A T+ PA PVS A P A +R A+T
Sbjct: 12 PKTLAAAAAAAPKAPTA---PAAVSFPVSHAACAPLAARRRAVT 52
>03_06_0222 +
32466379-32466741,32466849-32466948,32467443-32467547,
32467627-32467789,32467995-32468115,32468625-32468705,
32468813-32468911,32468955-32468986,32468987-32469137,
32469477-32469563,32470290-32470409,32470514-32470645,
32470743-32470840,32470919-32471042,32471126-32471233,
32471822-32471957,32472751-32472861,32472963-32473026,
32473133-32473205,32473762-32473938,32474012-32474122,
32474189-32474449,32474811-32474981,32475073-32475228,
32475590-32475823,32475936-32476103,32476316-32476425,
32476513-32477041
Length = 1394
Score = 29.5 bits (63), Expect = 2.4
Identities = 27/100 (27%), Positives = 41/100 (41%)
Frame = -1
Query: 435 SLIAGPSKEVEALNAAVGATAIAFGQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRV 256
SLI S ++A +A G+ + + P + TF GN+FT+ D VL
Sbjct: 696 SLICQLSTSLDASSAVNSVLTTGAGEDIANTK--PAIS--TFEDDGNNFTVSKLDIVLGG 751
Query: 255 AQFGHTVCLSGFMALDVPKPMGPLWILGDVFIGKYYTEFD 136
++ + K G W L D+ +G Y EFD
Sbjct: 752 SETKSVQLEVTPKVEGILKLHGIRWTLSDLLVGYQYFEFD 791
>12_02_0913 + 24246217-24247557
Length = 446
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -1
Query: 501 SVNVNASRFC--AQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIAFG 361
+ N + FC A GCS IA G ++AG + EA G +AFG
Sbjct: 153 AANDDIIHFCDLAAGCSVIAGYGAGVVAG-TLGTEAFAFQSGTAELAFG 200
>01_06_0154 - 27049218-27049517,27049679-27050107
Length = 242
Score = 29.1 bits (62), Expect = 3.1
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +2
Query: 197 GFGTSSAMKPDRHTVCPNCATRST*SLPSSVKSFPAMVKVTRGRCGMRLQSTTYCPKAMA 376
G G ++A P R C NC T ST ++ P K CG+R + A A
Sbjct: 112 GAGAAAASAPRR---CANCDTTST----PLWRNGPRGPKSLCNACGIRYKKEERRAAAAA 164
Query: 377 VAPTA 391
VAPTA
Sbjct: 165 VAPTA 169
>05_06_0170 - 26124178-26124670,26124699-26124703
Length = 165
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -3
Query: 340 PHTAPAASHLYHRRERLHARGQRLRAPGGTIRAHGVPVR 224
P AP A+ H ER AR LR P T+ AHG+ R
Sbjct: 128 PPFAPRAAEQEHDEERGEAR---LREPSDTVAAHGLDGR 163
>05_04_0125 - 18241542-18242129
Length = 195
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 367 GDGRGAHRRVEGFHLLGGPGDQRRARVGDGRAAL--GTEAASVD 492
GDGRG RR G +GG G R + G+G A G SVD
Sbjct: 113 GDGRGGRRRRRG---VGGSGGSRGSGHGEGGGAQQPGRRQRSVD 153
>10_06_0145 + 11215895-11216860
Length = 321
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +2
Query: 299 PAMVKVTRGRCGMRLQSTTYCPKAMAVAPTAALRASTSLEGPAISDVPVSAMAEQPWAQK 478
P +VK G C + STT A V+ T + + TS A + P + P +
Sbjct: 229 PRVVKTEPGCCSVSEASTTTTADAADVSSTGSSPSPTS-SNQAATATPPAPRPPPPLPET 287
Query: 479 RLALTLTESMWN 514
L TE+ W+
Sbjct: 288 IQQLDFTEAPWD 299
>10_06_0030 - 9834515-9834608,9834784-9835277
Length = 195
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -3
Query: 334 TAPAASHLYHRRERLHARGQRLRAPGGTIRAHGVPVRLHGAGRAEAHGPA 185
TA A + R R G+R GG H + R GAGR + H PA
Sbjct: 33 TAGAEDGRVYERAREGTTGKRTHQLGG----HSLSTRERGAGRKKGHWPA 78
>06_01_0754 - 5644310-5646292
Length = 660
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 385 HRRVEGFHLLGGPGDQRRARVGD-GRAALGTEAASVDIDRVHVELPVRVPE 534
HR V+ ++L G GD AR+GD G A L A+ RV L PE
Sbjct: 452 HRDVKANNVLLGAGDTGAARLGDFGLARLYEHGATPATTRVAGTLGYMAPE 502
>01_06_1487 - 37715421-37715942
Length = 173
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +1
Query: 286 REVVPGDGKGDSRQVRYEAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQRRARVGDGR 459
R ++ G+G G +V H+ PE DGR HR V G G +RR R D R
Sbjct: 34 RRMLGGEG-GARGEVEIPTEEHEDEPEPDGRRGHRPVVSD---GHRGRRRRCRNSDLR 87
>01_06_0963 + 33441731-33442096,33442175-33442270
Length = 153
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 351 VDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGH 241
VDC P P + L G ++ LR +QFG+
Sbjct: 89 VDCQPTPSFPGGILVFVSGNLQLAGEEHQLRFSQFGN 125
>01_06_0457 -
29524544-29525962,29526518-29526606,29526841-29526892,
29527573-29527677,29528181-29528208,29528279-29528343,
29528808-29528880,29528932-29529113
Length = 670
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +1
Query: 352 DVLPEGD-GRGAHRRVEGFHLLGGPGDQR 435
D+LPEG GRG R ++G++L+ D+R
Sbjct: 383 DILPEGHPGRGRSRVMKGWYLIYSSTDER 411
>01_01_1005 + 7968862-7969755
Length = 297
Score = 28.3 bits (60), Expect = 5.4
Identities = 40/142 (28%), Positives = 54/142 (38%), Gaps = 19/142 (13%)
Frame = +1
Query: 121 LAVPRVELRVVLADEHVPQDPQRAHGLRHVQRHEAGQAHRVPELCHPEHVVVA------- 279
L VP R LA + + Q G +Q EA + P+L P H +A
Sbjct: 94 LEVPAARARWQLAADRERDEAQLTVGDAEIQGEEAVREIHPPDLLGPHHHAIAAPWTVAR 153
Query: 280 --LEREVVPGD-GKGDSRQVRYEAAVHDVLPEGDGRGAHRRV---------EGFHLLGGP 423
+E +V PG G+G Q A + GD G R +G +G
Sbjct: 154 RVVELQVAPGSRGRGVQEQRGVVGADDRGVEIGDEVGVARDAGEAGVAGVEDGEAGVGEA 213
Query: 424 GDQRRARVGDGRAALGTEAASV 489
G RARV D LG +A +V
Sbjct: 214 GGLVRARVAD-EVRLGEQAMAV 234
>04_04_1577 +
34554819-34554995,34555672-34555754,34555906-34556229,
34556347-34556602,34556951-34557031,34557106-34557213,
34557300-34557329,34557475-34557612,34557737-34557774,
34557858-34557957,34558194-34558268
Length = 469
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -1
Query: 549 VRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAI 370
+R LLR + W + N A+R + ++ A G + P ++ L A+ AI
Sbjct: 14 LRDALLRGSAWR-GAPAANSAAARLASTASASEAAAGPKKVPPPPRKGRLLTGAMIGLAI 72
Query: 369 AFGQYV 352
A G YV
Sbjct: 73 AGGAYV 78
>07_01_0432 + 3290546-3291911,3291972-3291988
Length = 460
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 223 AGQAHRVPELCHPEHVVVALEREVVPGDGKGDSRQVRYEAAVHDVLPEG 369
A R + P+ V+ +ER +VP + D + R AA+ VLP G
Sbjct: 166 AAAVTRPDAVVRPDGVIHGIERLLVPRSVQEDFNRRRSLAAISAVLPTG 214
>06_03_0405 - 20464701-20466287
Length = 528
Score = 27.5 bits (58), Expect = 9.5
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -1
Query: 330 HLPRVTFTIAGNDFTLEGNDYVL--RVAQFGHTVCLSGFMALDVPKPMGPLWILGDVFIG 157
H RV G+D+ EG Y R+ +F V LSG ++ V G W+ +G
Sbjct: 103 HRVRVRARSGGHDY--EGLSYRAEGRLERFA-VVDLSGMRSVRVDAARGTAWVQSGATLG 159
Query: 156 KYYTEFDAGNRQLGF 112
+ Y + +LGF
Sbjct: 160 ELYHAIWSSAPRLGF 174
>05_07_0330 -
29318549-29318895,29320084-29320189,29320287-29320613,
29320714-29321271
Length = 445
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -1
Query: 501 SVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIA 367
SV + S + A+ GTSL+AGP+ + L AA A A A
Sbjct: 59 SVASDCSSVASADFEGFAELGTSLLAGPAVLFDDLTAASVAVAEA 103
>05_03_0118 -
8586731-8587220,8587331-8587846,8588842-8588906,
8589483-8589989
Length = 525
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 268 RAPGGTIRAHGVPVRLHGAGRAEAHG 191
RA GG R G+ R H GR E HG
Sbjct: 285 RARGGGARGRGLGPRAHFDGRFEPHG 310
>04_04_0555 -
26210346-26211458,26211530-26211719,26211826-26211960,
26212072-26212169,26212262-26212425,26213558-26214032
Length = 724
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 424 GDQRRARVGDGRAALGTEAASVDIDRVHVELPV 522
GD+ DG AA EAA+ ++RV + PV
Sbjct: 37 GDRATGPSRDGAAAAAEEAAAPSVERVFADRPV 69
>01_06_1069 + 34275823-34276167
Length = 114
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = +1
Query: 301 GDGKGDSRQVRYEAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQRRARVGDGRAALGTEA 480
G+G G+ R+VR VH +GDG G G GG G A V A
Sbjct: 21 GEGDGEGRRVRRRPMVHAGGGDGDGGGDG---VGRGREGGCGGPYAAMVRGSTATAAVSL 77
Query: 481 ASVDIDRV 504
S + R+
Sbjct: 78 RSAPLGRI 85
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 238 RVPELCHPEHVVVALEREVVPGDGKGDSRQVRYEAAVHDVLPEGDGRGAH 387
RVPE+ H ++ + G G G++ AA D++ E + R AH
Sbjct: 317 RVPEVVEFYHSLMRRDSRSRDGSGGGETANGGGVAATRDMIGEIENRSAH 366
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,376,433
Number of Sequences: 37544
Number of extensions: 387788
Number of successful extensions: 1656
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1649
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -