Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_G11
         (672 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0034 - 228939-229028,229117-229230,229309-229430,229827-23...    75   5e-14
08_02_1145 - 24674319-24674403,24674691-24674746,24674885-246749...    29   2.6  
07_03_1709 - 28873172-28873327,28873519-28873584,28874067-288741...    29   4.5  
07_03_0820 - 21749477-21749866,21751192-21751590                       29   4.5  
02_01_0706 + 5270233-5270326,5270767-5270914,5271018-5271089,527...    28   7.8  

>05_01_0034 -
           228939-229028,229117-229230,229309-229430,229827-230056,
           230458-230537,230641-230859
          Length = 284

 Score = 74.9 bits (176), Expect = 5e-14
 Identities = 34/104 (32%), Positives = 58/104 (55%)
 Frame = -3

Query: 667 YAMDVYELNRRVNSXESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRM 488
           Y  ++Y  + +VN  E IVGW++TG  V+  S++IH++YSRE + P+H+T+DT    G  
Sbjct: 80  YHHNMYASHHKVNPKEVIVGWFSTGFGVSGGSTLIHDFYSREVQSPIHLTVDTGFTRGDA 139

Query: 487 GLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKT 356
            ++AY+   L + +      F  + + L   E   VG  + + T
Sbjct: 140 SIKAYISSNLSLGDRHLAAQFQEIPLDLRMLEAGKVGFDILKST 183


>08_02_1145 -
           24674319-24674403,24674691-24674746,24674885-24674965,
           24675063-24675137,24675418-24675479,24675857-24675950,
           24676674-24676762,24676864-24677194
          Length = 290

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = -3

Query: 649 ELNRRVNSXESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSL 503
           EL ++V     ++GW++TG++V +    IH+        PV++ L+ ++
Sbjct: 109 ELYKKVFPDFYVLGWYSTGSDVRDTDMQIHKALMDINESPVYLLLNPAI 157


>07_03_1709 -
           28873172-28873327,28873519-28873584,28874067-28874127,
           28875406-28875462,28876301-28876531,28876685-28876799,
           28876897-28877136,28877222-28877316,28877406-28877585,
           28877663-28877839,28877920-28878890
          Length = 782

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 435 PCFPFGTPNGTQTYARKPIRPPASEVSRVTWTG 533
           P  PF +P  +  +AR P  P  +E+S    TG
Sbjct: 599 PDSPFASPTKSAGFARDPFAPTEAEISATASTG 631


>07_03_0820 - 21749477-21749866,21751192-21751590
          Length = 262

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 201 AAPSCSSHIPHLTLPRTPSQMPSPP 127
           ++PS SS   H  LPR P+  P PP
Sbjct: 25  SSPSSSSSSTHSLLPRPPALWPPPP 49


>02_01_0706 +
           5270233-5270326,5270767-5270914,5271018-5271089,
           5271153-5271263,5271363-5271434,5271533-5271604,
           5272126-5272197,5272281-5272346,5272426-5272491,
           5272601-5272971,5273203-5273456,5273886-5274157,
           5274333-5274474,5275174-5275313,5275381-5275537,
           5275797-5275965,5276048-5276088
          Length = 772

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = -3

Query: 664 AMDVYELNRRVNSXESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTS--LAGGR 491
           A+ ++EL R ++S   + GW + G +          ++   CR+   V L+ S    GG 
Sbjct: 32  ALGLWELYRTLDSPWQLSGWTSQGGDPCGRGGEQRPWHGVLCRDSSIVALNISGLGVGGW 91

Query: 490 MGL 482
           +GL
Sbjct: 92  LGL 94


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,121,002
Number of Sequences: 37544
Number of extensions: 287196
Number of successful extensions: 833
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)