Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_G11
(672 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 139 1e-32
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 139 1e-32
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 139 1e-32
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 139 1e-32
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 139 1e-32
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 124 4e-28
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 44 5e-04
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 44 5e-04
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 44 5e-04
AL050051-1|CAB43251.1| 118|Homo sapiens hypothetical protein pr... 30 8.7
AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens ... 30 8.7
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 139 bits (336), Expect = 1e-32
Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 1/205 (0%)
Frame = -3
Query: 667 YAMDVYELNRRVNSXESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRM 488
+A ++YEL+++V+ E I+GW+ATG+++T HS +IHEYYSRE P+H+T+DTSL GRM
Sbjct: 152 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 211
Query: 487 GLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXXXXXSD 308
++AYV +GVP G MFTP+ V Y+ E +G+ + KT SD
Sbjct: 212 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKT---CFSPNRVIGLSSD 268
Query: 307 LAQV-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAKDTFSDAFA 131
L QV L+ L + P + D F
Sbjct: 269 LQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLN 328
Query: 130 SSVKDLLMVVTLAQLIKTQLQLNEK 56
S++ DLLMV LA L ++Q+ LNEK
Sbjct: 329 SNINDLLMVTYLANLTQSQIALNEK 353
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 139 bits (336), Expect = 1e-32
Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 1/205 (0%)
Frame = -3
Query: 667 YAMDVYELNRRVNSXESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRM 488
+A ++YEL+++V+ E I+GW+ATG+++T HS +IHEYYSRE P+H+T+DTSL GRM
Sbjct: 152 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 211
Query: 487 GLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXXXXXSD 308
++AYV +GVP G MFTP+ V Y+ E +G+ + KT SD
Sbjct: 212 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKT---CFSPNRVIGLSSD 268
Query: 307 LAQV-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAKDTFSDAFA 131
L QV L+ L + P + D F
Sbjct: 269 LQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLN 328
Query: 130 SSVKDLLMVVTLAQLIKTQLQLNEK 56
S++ DLLMV LA L ++Q+ LNEK
Sbjct: 329 SNINDLLMVTYLANLTQSQIALNEK 353
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 139 bits (336), Expect = 1e-32
Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 1/205 (0%)
Frame = -3
Query: 667 YAMDVYELNRRVNSXESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRM 488
+A ++YEL+++V+ E I+GW+ATG+++T HS +IHEYYSRE P+H+T+DTSL GRM
Sbjct: 152 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 211
Query: 487 GLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXXXXXSD 308
++AYV +GVP G MFTP+ V Y+ E +G+ + KT SD
Sbjct: 212 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKT---CFSPNRVIGLSSD 268
Query: 307 LAQV-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAKDTFSDAFA 131
L QV L+ L + P + D F
Sbjct: 269 LQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLN 328
Query: 130 SSVKDLLMVVTLAQLIKTQLQLNEK 56
S++ DLLMV LA L ++Q+ LNEK
Sbjct: 329 SNINDLLMVTYLANLTQSQIALNEK 353
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 139 bits (336), Expect = 1e-32
Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 1/205 (0%)
Frame = -3
Query: 667 YAMDVYELNRRVNSXESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRM 488
+A ++YEL+++V+ E I+GW+ATG+++T HS +IHEYYSRE P+H+T+DTSL GRM
Sbjct: 152 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 211
Query: 487 GLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXXXXXSD 308
++AYV +GVP G MFTP+ V Y+ E +G+ + KT SD
Sbjct: 212 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKT---CFSPNRVIGLSSD 268
Query: 307 LAQV-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAKDTFSDAFA 131
L QV L+ L + P + D F
Sbjct: 269 LQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLN 328
Query: 130 SSVKDLLMVVTLAQLIKTQLQLNEK 56
S++ DLLMV LA L ++Q+ LNEK
Sbjct: 329 SNINDLLMVTYLANLTQSQIALNEK 353
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 139 bits (336), Expect = 1e-32
Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 1/205 (0%)
Frame = -3
Query: 667 YAMDVYELNRRVNSXESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRM 488
+A ++YEL+++V+ E I+GW+ATG+++T HS +IHEYYSRE P+H+T+DTSL GRM
Sbjct: 145 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 204
Query: 487 GLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXXXXXSD 308
++AYV +GVP G MFTP+ V Y+ E +G+ + KT SD
Sbjct: 205 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKT---CFSPNRVIGLSSD 261
Query: 307 LAQV-MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAKDTFSDAFA 131
L QV L+ L + P + D F
Sbjct: 262 LQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLN 321
Query: 130 SSVKDLLMVVTLAQLIKTQLQLNEK 56
S++ DLLMV LA L ++Q+ LNEK
Sbjct: 322 SNINDLLMVTYLANLTQSQIALNEK 346
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 124 bits (298), Expect = 4e-28
Identities = 70/208 (33%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Frame = -3
Query: 667 YAMDVYELNRRVNSXESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRM 488
+A ++YEL+++V+ E I+GW+A G+++T HS +IHEYYSRE P+H+T+DTSL G M
Sbjct: 141 FAKNMYELHKKVSPNELILGWYAAGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGHM 200
Query: 487 GLRAYVCVPLGVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXXXXXSD 308
++AYV +GVP G+ +FTP+ V Y+ E + + + KT SD
Sbjct: 201 SIKAYVSTLMGVP-GRTVGVFTPLTVKYAYYDTECIRVDLIMKT---CFSPNRVVGLSSD 256
Query: 307 LAQVMXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAKDTFSD 140
L QV L+ L + P + D F
Sbjct: 257 LQQVGGASAHIQDALSIVLQYAEDILSAKVSADNTIRKVGHFLMSLVNQVPKIVPDDFET 316
Query: 139 AFASSVKDLLMVVTLAQLIKTQLQLNEK 56
S++ DLLMV LA L ++Q+ LNEK
Sbjct: 317 MLHSNINDLLMVAYLANLTQSQIALNEK 344
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 44.0 bits (99), Expect = 5e-04
Identities = 44/204 (21%), Positives = 75/204 (36%), Gaps = 1/204 (0%)
Frame = -3
Query: 670 NYAMDVYELNRRVNSXESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGR 491
+Y ++Y + ++VN+ E IVGW+ TG ++ + I+E R C V V +D
Sbjct: 73 DYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLG 132
Query: 490 MGLRAYVCVPLGVPNG-KQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXXXXX 314
+ AY+ V +G F V + E E VG++ +
Sbjct: 133 LPTEAYISVEEDQDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRIT 192
Query: 313 SDLAQVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAKDTFSDAF 134
+ QV L + + PD++ F AF
Sbjct: 193 N---QVHGLKGLNSKLLDIRSYLEKVGTGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAF 249
Query: 133 ASSVKDLLMVVTLAQLIKTQLQLN 62
D ++VV LA LI++ + L+
Sbjct: 250 YLKTNDQMVVVYLASLIRSVVALH 273
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 44.0 bits (99), Expect = 5e-04
Identities = 46/207 (22%), Positives = 76/207 (36%), Gaps = 4/207 (1%)
Frame = -3
Query: 670 NYAMDVYELNRRVNSXESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGR 491
+Y ++Y + ++VN+ E IVGW+ TG ++ + I+E R C V V +D
Sbjct: 73 DYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLG 132
Query: 490 MGLRAYVCVPL----GVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXX 323
+ AY+ V G P K F V + E E VG++ +
Sbjct: 133 LPTEAYISVEEVHDDGTPTSK---TFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQ 189
Query: 322 XXXSDLAQVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAKDTFS 143
+ QV L + + PD++ F
Sbjct: 190 RITN---QVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFV 246
Query: 142 DAFASSVKDLLMVVTLAQLIKTQLQLN 62
AF D ++VV LA LI++ + L+
Sbjct: 247 KAFYLKTNDQMVVVYLASLIRSVVALH 273
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 44.0 bits (99), Expect = 5e-04
Identities = 46/207 (22%), Positives = 76/207 (36%), Gaps = 4/207 (1%)
Frame = -3
Query: 670 NYAMDVYELNRRVNSXESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGR 491
+Y ++Y + ++VN+ E IVGW+ TG ++ + I+E R C V V +D
Sbjct: 73 DYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLG 132
Query: 490 MGLRAYVCVPL----GVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXX 323
+ AY+ V G P K F V + E E VG++ +
Sbjct: 133 LPTEAYISVEEVHDDGTPTSK---TFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQ 189
Query: 322 XXXSDLAQVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLQLAHSAPDLAKDTFS 143
+ QV L + + PD++ F
Sbjct: 190 RITN---QVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFV 246
Query: 142 DAFASSVKDLLMVVTLAQLIKTQLQLN 62
AF D ++VV LA LI++ + L+
Sbjct: 247 KAFYLKTNDQMVVVYLASLIRSVVALH 273
>AL050051-1|CAB43251.1| 118|Homo sapiens hypothetical protein
protein.
Length = 118
Score = 29.9 bits (64), Expect = 8.7
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 538 REPVHVTLDTSLAGGRMGLRAYVCVPLG-VPNGKQGCMFTPVDVTLTC 398
R PV V+ L G G+R+ + V L +P G+ GC FT + V L C
Sbjct: 10 RVPVRVSSAPGLGFGGAGMRSLLSVGLPPIPIGR-GCHFTLITVFLYC 56
>AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens
cDNA FLJ46559 fis, clone THYMU3040126. ).
Length = 303
Score = 29.9 bits (64), Expect = 8.7
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -2
Query: 485 FTCICLCTIRSAKWKARLHVHSCRC-HSHV 399
+TC+C+CT A +H H C C H+H+
Sbjct: 106 YTCVCVCT------HAYIHTHVCVCVHTHI 129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,268,023
Number of Sequences: 237096
Number of extensions: 1640034
Number of successful extensions: 3993
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3991
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -