Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_G09
         (498 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82080-6|CAE45090.1|   80|Caenorhabditis elegans Hypothetical pr...    56   1e-08
Z73899-8|CAA98079.2|  669|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z75537-1|CAA99834.1|  455|Caenorhabditis elegans Hypothetical pr...    27   7.6  
Z73098-5|CAA97332.1|  103|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U46753-2|AAA85760.1|  894|Caenorhabditis elegans Hypothetical pr...    27   10.0 

>Z82080-6|CAE45090.1|   80|Caenorhabditis elegans Hypothetical
           protein W09G3.8 protein.
          Length = 80

 Score = 56.0 bits (129), Expect = 1e-08
 Identities = 29/80 (36%), Positives = 49/80 (61%)
 Frame = -2

Query: 308 LTLWNLFEATLLCLNAVCVLHEERFMQKIGWGANTQTQGFEDQSSMKFQXLNLVRSIRTV 129
           L+ + L EA LL LN + +LH ERF++K G GA   +  F+  +S+K Q ++L+ +++TV
Sbjct: 3   LSFYALLEAALLVLNGIAILHRERFLKKYGLGA--PSHSFDGSNSVKDQLVSLIFAVQTV 60

Query: 128 TKIPXXRRXSLTRMXKL*LG 69
            ++P      +  + KL LG
Sbjct: 61  MRMPLIAINIVVIVFKLILG 80


>Z73899-8|CAA98079.2|  669|Caenorhabditis elegans Hypothetical
           protein ZK829.10 protein.
          Length = 669

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 9/52 (17%), Positives = 30/52 (57%)
 Frame = -1

Query: 372 VVTTLVFTSTWSTKIIIGKKYAHFMEFI*SNIVMSQRSMCITRRKIHAENWL 217
           +++  V++    T+ I+G+K  + +  + + ++++  +  +  R++ A +WL
Sbjct: 314 IISATVYSILGYTRFILGRKSVYDLTVLPNGLLLTHSTFPVLLRQVAANSWL 365


>Z75537-1|CAA99834.1|  455|Caenorhabditis elegans Hypothetical
           protein F18E2.1 protein.
          Length = 455

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +1

Query: 184 SSKPWVWVFAPQPIFCMNLSS 246
           ++ PW++ F  +P +C N++S
Sbjct: 262 AAHPWIFTFQHRPFYCSNVNS 282


>Z73098-5|CAA97332.1|  103|Caenorhabditis elegans Hypothetical
           protein T21C9.4 protein.
          Length = 103

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 299 WNLFEATLLCLNAVCVLHEERFMQKI 222
           W+ +E T  CL  +C ++EE   +K+
Sbjct: 19  WSDYENTTECLEGICRVYEEYLKKKV 44


>U46753-2|AAA85760.1|  894|Caenorhabditis elegans Hypothetical
           protein C34F11.5 protein.
          Length = 894

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 228 ENWLGSKYPNPGL*RSIFDEIPN 160
           +NWL  K+P P L +   + IPN
Sbjct: 455 DNWLNIKFPPPSLEKRTVNMIPN 477


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,958,932
Number of Sequences: 27780
Number of extensions: 158921
Number of successful extensions: 323
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 323
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)