Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_G02
         (596 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    26   0.24 
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   1.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.0  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              21   9.2  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = -3

Query: 579 YAIKLKEETPIGTEKIYYGTLTPQIKAIK--IFSLCTSIAGIAIQPMLIREASSIGSTSL 406
           Y +  +EE        Y  +  PQ ++ +  +++L T  AG+AI   L   A+  G+T +
Sbjct: 7   YLLGSEEEGNQLNRSFYSASYPPQNRSQEEDLWNLATDRAGLAILLFLFSVATVFGNTLV 66

Query: 405 LVAI 394
           ++A+
Sbjct: 67  ILAV 70


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 106 LIIAHDLCIVQWVIEESCFNEQRLAISMHSSEHSW 210
           L +   L    WV      NEQR  ++MH +  S+
Sbjct: 82  LYVCRVLHTTVWVAGAQRGNEQRCTVTMHGTVQSY 116


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 312 YNAETSTYKAITINFFATK 256
           YNA  ST KAI   F  TK
Sbjct: 271 YNAAVSTTKAINQGFRTTK 289


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 523 NINTSDKGHKNILFM 479
           N+++SDK  K+ +FM
Sbjct: 115 NVDSSDKCEKSFMFM 129


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,807
Number of Sequences: 438
Number of extensions: 4095
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)