Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_F20
         (394 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   1.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    22   7.0  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    22   9.2  
AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase pr...    22   9.2  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    22   9.2  

>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +3

Query: 147 LLSFLHDEKLPFPCAVAPNVNPL-VLVQLTFSSF*KLTVSNLYIK 278
           L+  +H  ++P PC     +NP+ VL  +  ++       N+ +K
Sbjct: 392 LVHLMHPTRVPKPCCAPTKLNPISVLYHIDDANINLKKYKNMVVK 436


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 154 RFYMMRSSHFLAQLHPM 204
           R+ M+R+SH  A  HP+
Sbjct: 399 RYQMLRASHHSAAGHPL 415


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 153 SFLHDEKLPFPCAVAPNVNPL 215
           SF H EK PFP  +  ++N L
Sbjct: 25  SFPHGEKAPFPLTLI-HINDL 44


>AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase
           protein.
          Length = 98

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 153 SFLHDEKLPFPCAVAPNVNPL 215
           SF H EK PFP  +  ++N L
Sbjct: 25  SFPHGEKAPFPLTLI-HINDL 44


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +1

Query: 316 NYIVMLKYDHSSVYYVFITLVNSNS 390
           N++  LKYD+ S+  ++  L+ S +
Sbjct: 306 NFVDALKYDYPSLEQIWRVLLRSKT 330


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 381,110
Number of Sequences: 2352
Number of extensions: 6877
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)