Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_F16
(415 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-56|CAB16513.1| 131|Caenorhabditis elegans Hypothetical p... 62 2e-10
U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon ge... 32 0.14
AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein. 32 0.14
Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical pr... 29 1.3
AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threon... 29 1.3
AF002198-8|AAF99931.2| 300|Caenorhabditis elegans Serpentine re... 27 4.1
AF039047-7|AAK95883.1| 187|Caenorhabditis elegans Hypothetical ... 27 5.4
Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z83235-3|CAB05771.1| 370|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z75554-4|CAA99957.2| 534|Caenorhabditis elegans Hypothetical pr... 26 9.4
AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical... 26 9.4
>Z99281-56|CAB16513.1| 131|Caenorhabditis elegans Hypothetical
protein Y57G11C.12b protein.
Length = 131
Score = 61.7 bits (143), Expect = 2e-10
Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Frame = -2
Query: 363 LKMSARQAIKVG---TKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQ 193
+ +A + ++ G +TV P+ S++ AEAR VL+ YK + R P D+ +
Sbjct: 1 MSATAGRVVRAGQHAVRTVAPIKSNNSAEARMSVLAAYKEFQRLTPKFWWDFGLHDMPLG 60
Query: 192 C-REKLKELFIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAY-FKPTEEPKPK 19
R +K+ F KN H+TD+RV+D LV + +K + H+ Y F E KPK
Sbjct: 61 VFRAVIKKQFTKNGHLTDVRVVDRLVGETHQHMKSIRYAFYNPDHVRNYLFAENVEAKPK 120
Query: 18 XGLAK 4
L+K
Sbjct: 121 DFLSK 125
>U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon gene
protein 1 protein.
Length = 892
Score = 32.3 bits (70), Expect = 0.14
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +1
Query: 67 LLFPYVHRLFQLHLTLNNQHINDSNISHMFVL-NEE----FFQFLSTLCF*LGNVIILHY 231
+LF + L+ L+N H+N S ISH F L N+E + FL TL F L I +
Sbjct: 99 ILFENIRHETSLYFLLSNNHVN-SIISHKFDLQNDEIMAYYISFLKTLSFKLNPATIHFF 157
Query: 232 IGDLT 246
+ T
Sbjct: 158 FNETT 162
>AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein.
Length = 885
Score = 32.3 bits (70), Expect = 0.14
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +1
Query: 67 LLFPYVHRLFQLHLTLNNQHINDSNISHMFVL-NEE----FFQFLSTLCF*LGNVIILHY 231
+LF + L+ L+N H+N S ISH F L N+E + FL TL F L I +
Sbjct: 92 ILFENIRHETSLYFLLSNNHVN-SIISHKFDLQNDEIMAYYISFLKTLSFKLNPATIHFF 150
Query: 232 IGDLT 246
+ T
Sbjct: 151 FNETT 155
>Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical
protein F15A2.6b protein.
Length = 835
Score = 29.1 bits (62), Expect = 1.3
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -2
Query: 336 KVGTKTV-KPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIK 160
KV K V K LS S + R +++ K + P+++ YD+ E K L++
Sbjct: 72 KVAIKIVNKEKLSESVLQKVEREIAIMKLI--EHPHVLHLYDV-------YENKKYLYLL 122
Query: 159 NKHVTDIRVIDMLVIKGQMELKESVNIWKQ 70
+HV+ + D LV KG++ KE+ ++Q
Sbjct: 123 LEHVSGGELFDYLVRKGRLMSKEARKFFRQ 152
>Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical
protein F15A2.6a protein.
Length = 914
Score = 29.1 bits (62), Expect = 1.3
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -2
Query: 336 KVGTKTV-KPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIK 160
KV K V K LS S + R +++ K + P+++ YD+ E K L++
Sbjct: 72 KVAIKIVNKEKLSESVLQKVEREIAIMKLI--EHPHVLHLYDV-------YENKKYLYLL 122
Query: 159 NKHVTDIRVIDMLVIKGQMELKESVNIWKQ 70
+HV+ + D LV KG++ KE+ ++Q
Sbjct: 123 LEHVSGGELFDYLVRKGRLMSKEARKFFRQ 152
>AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threonine
kinase SAD-1 protein.
Length = 914
Score = 29.1 bits (62), Expect = 1.3
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -2
Query: 336 KVGTKTV-KPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIK 160
KV K V K LS S + R +++ K + P+++ YD+ E K L++
Sbjct: 72 KVAIKIVNKEKLSESVLQKVEREIAIMKLI--EHPHVLHLYDV-------YENKKYLYLL 122
Query: 159 NKHVTDIRVIDMLVIKGQMELKESVNIWKQ 70
+HV+ + D LV KG++ KE+ ++Q
Sbjct: 123 LEHVSGGELFDYLVRKGRLMSKEARKFFRQ 152
>AF002198-8|AAF99931.2| 300|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 3 protein.
Length = 300
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 53 AIMCPFCFHMFTDSFNSI*PLITSISMTRISVTCLFL 163
AI P FH + DS+ SI L+ +IS++ ++L
Sbjct: 115 AIYTPIMFHKYRDSYPSIIILMLAISLSMFENLLMYL 151
>AF039047-7|AAK95883.1| 187|Caenorhabditis elegans Hypothetical
protein K11D12.7 protein.
Length = 187
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 316 YGFCTNFYCLPCRHFQSESISDSIQHKN 399
Y C+NF C+P +F SDS+ KN
Sbjct: 70 YSACSNF-CIPMDYFTCPGGSDSVAGKN 96
>Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 26.6 bits (56), Expect = 7.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 46 EVGHNVPLLFPYVHRLFQ 99
E GHNV L P +HR ++
Sbjct: 49 EAGHNVTFLMPIIHREYE 66
>Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 26.6 bits (56), Expect = 7.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 46 EVGHNVPLLFPYVHRLFQ 99
E GHNV L P +HR ++
Sbjct: 49 EAGHNVTFLMPIIHREYE 66
>Z83235-3|CAB05771.1| 370|Caenorhabditis elegans Hypothetical
protein K10C3.4 protein.
Length = 370
Score = 26.2 bits (55), Expect = 9.4
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -2
Query: 276 RVLSLYKA-WYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQME 100
R LSL W +PY + D K + ++ L E+ N H+ IR LV +
Sbjct: 154 RALSLGTVCWSLYLPYTLLD---AKYKELMQKPLNEM---NLHLVTIRTAAHLVSMAEKG 207
Query: 99 LKESVNIWKQKGHIM 55
++ +NI K H+M
Sbjct: 208 AEDKLNIVDLKDHLM 222
>Z75554-4|CAA99957.2| 534|Caenorhabditis elegans Hypothetical
protein ZC455.6a protein.
Length = 534
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 46 EVGHNVPLLFPYVHRLFQLHLTLNNQHINDSNISH 150
+ GH V P+V LF+ H + N +I N H
Sbjct: 47 DAGHQVTYFQPFVVELFKDHDLIKNPNIEIMNYFH 81
>AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical
protein ZK973.1 protein.
Length = 745
Score = 26.2 bits (55), Expect = 9.4
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -2
Query: 294 HAEARNRVLSLYKAWYRQ-IPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLV 118
H +R V K +Y++ + Y +K+Y IP+ E + LK+ V +D L+
Sbjct: 271 HPFSRKSVYFGMKNFYQEALAYSIKNYFIPRIERKMANHLKDKAKDRSIVLFGENVDQLL 330
Query: 117 IKGQMELKESVNIWKQKGHI-MAYFKPTEE 31
+ + K + + + I A+ KPT E
Sbjct: 331 SQEGIRDKFVIALDPGRSKIKTAFLKPTGE 360
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,879,172
Number of Sequences: 27780
Number of extensions: 167466
Number of successful extensions: 465
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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