Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_F10
         (722 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2EVZ1 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_A0DNC9 Cluster: Chromosome undetermined scaffold_58, wh...    33   9.4  

>UniRef50_A2EVZ1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 523

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +1

Query: 274 FSPKHIFAM--ESWVLTLKCYDKYKKVNCKFRPTSQKD*TINKYLNYNKHKIHVDN 435
           FS  HI  M  E   + + C++ + K +C+F  T  K  TIN Y + N ++I V N
Sbjct: 75  FSRNHIGKMKIEFEEIVVCCWNVFSKYDCRFHITKDKKITINTY-DCNNNQIFVKN 129


>UniRef50_A0DNC9 Cluster: Chromosome undetermined scaffold_58, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_58,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 817

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -1

Query: 710 RLHVIVKLFRIIYHILSEKWQLTSRCGHWTLKRNYIYKIIY-*VEDRKHIWLIYFISNVP 534
           R+  I+ L  +   I+ +  ++  R  H  L  ++IY IIY  +     IW  Y++ N+ 
Sbjct: 27  RIPTIIYLIVLTVMIIQQILKIKFRISHSELILSFIYNIIYITLFGTSSIWQAYYVMNIF 86

Query: 533 MNVNY 519
              NY
Sbjct: 87  QKTNY 91


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,526,401
Number of Sequences: 1657284
Number of extensions: 11243301
Number of successful extensions: 19882
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19878
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)