Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_F09
         (721 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          29   0.14 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    29   0.19 
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   7.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.5  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 29.1 bits (62), Expect = 0.14
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 489 IPIPSKPTKAKV*QVSNEFLLDTCVKTISLYE 584
           IP+P+ P    + +VS + +LD C + ++LY+
Sbjct: 254 IPLPNNPPWFVIFRVSEDDMLDVCYRIMALYK 285


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 28.7 bits (61), Expect = 0.19
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 250 LSTKKYFLSHRKLIIIQY*ESH*QHLKWPEAKHSAYQYQHPGVLSHRR 393
           L+T    LS   L + Q  +   +HL   +A H  +Q Q+P  + HRR
Sbjct: 594 LTTTTVLLSDHYLPLQQQQQQQARHLPQQQAIHHIHQQQYPRQVIHRR 641


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 192 KSFLISTYIDGLQFY 236
           K F+I+TYI G+ +Y
Sbjct: 308 KLFIITTYISGILYY 322


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 232  NWSPSIYVDIKNDF 191
            NW  +I+ DIK DF
Sbjct: 3226 NWLDNIFKDIKEDF 3239


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,880
Number of Sequences: 2352
Number of extensions: 15008
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)