Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_F09
         (721 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011075-1|AAR82740.1|  465|Drosophila melanogaster SD09672p pro...    31   2.1  
AF301149-1|AAG15387.1|  764|Drosophila melanogaster SR protein k...    31   2.1  
AE013599-2054|AAM68538.1|  607|Drosophila melanogaster CG8174-PC...    31   2.1  
AE013599-2053|AAM68537.1|  764|Drosophila melanogaster CG8174-PB...    31   2.1  
AE013599-2052|AAF58140.2|  764|Drosophila melanogaster CG8174-PA...    31   2.1  

>BT011075-1|AAR82740.1|  465|Drosophila melanogaster SD09672p
           protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = +3

Query: 72  NLHNSTPYVLK-LELLHTNVF*LLLVLHIEYNQE*TLQSYGKSFLISTYIDGLQFYCMFQ 248
           N+   T  VL+ L+ LHT       ++H +   E  L    +  + S   +  Q YCM  
Sbjct: 278 NVKTITRQVLEGLDYLHT----CCKIIHTDIKPENVLLCVDEPHVRSLATEATQLYCMNS 333

Query: 249 SQHKKILSESPQAYYHP 299
             +  ++S +P+ Y  P
Sbjct: 334 KMYPSLVSRAPKEYREP 350


>AF301149-1|AAG15387.1|  764|Drosophila melanogaster SR protein
           kinase 1 protein.
          Length = 764

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = +3

Query: 72  NLHNSTPYVLK-LELLHTNVF*LLLVLHIEYNQE*TLQSYGKSFLISTYIDGLQFYCMFQ 248
           N+   T  VL+ L+ LHT       ++H +   E  L    +  + S   +  Q YCM  
Sbjct: 278 NVKTITRQVLEGLDYLHT----CCKIIHTDIKPENVLLCVDEPHVRSLATEATQLYCMNS 333

Query: 249 SQHKKILSESPQAYYHP 299
             +  ++S +P+ Y  P
Sbjct: 334 KMYPSLVSRAPKEYREP 350


>AE013599-2054|AAM68538.1|  607|Drosophila melanogaster CG8174-PC,
           isoform C protein.
          Length = 607

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = +3

Query: 72  NLHNSTPYVLK-LELLHTNVF*LLLVLHIEYNQE*TLQSYGKSFLISTYIDGLQFYCMFQ 248
           N+   T  VL+ L+ LHT       ++H +   E  L    +  + S   +  Q YCM  
Sbjct: 121 NVKTITRQVLEGLDYLHT----CCKIIHTDIKPENVLLCVDEPHVRSLATEATQLYCMNS 176

Query: 249 SQHKKILSESPQAYYHP 299
             +  ++S +P+ Y  P
Sbjct: 177 KMYPSLVSRAPKEYREP 193


>AE013599-2053|AAM68537.1|  764|Drosophila melanogaster CG8174-PB,
           isoform B protein.
          Length = 764

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = +3

Query: 72  NLHNSTPYVLK-LELLHTNVF*LLLVLHIEYNQE*TLQSYGKSFLISTYIDGLQFYCMFQ 248
           N+   T  VL+ L+ LHT       ++H +   E  L    +  + S   +  Q YCM  
Sbjct: 278 NVKTITRQVLEGLDYLHT----CCKIIHTDIKPENVLLCVDEPHVRSLATEATQLYCMNS 333

Query: 249 SQHKKILSESPQAYYHP 299
             +  ++S +P+ Y  P
Sbjct: 334 KMYPSLVSRAPKEYREP 350


>AE013599-2052|AAF58140.2|  764|Drosophila melanogaster CG8174-PA,
           isoform A protein.
          Length = 764

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = +3

Query: 72  NLHNSTPYVLK-LELLHTNVF*LLLVLHIEYNQE*TLQSYGKSFLISTYIDGLQFYCMFQ 248
           N+   T  VL+ L+ LHT       ++H +   E  L    +  + S   +  Q YCM  
Sbjct: 278 NVKTITRQVLEGLDYLHT----CCKIIHTDIKPENVLLCVDEPHVRSLATEATQLYCMNS 333

Query: 249 SQHKKILSESPQAYYHP 299
             +  ++S +P+ Y  P
Sbjct: 334 KMYPSLVSRAPKEYREP 350


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,338,911
Number of Sequences: 53049
Number of extensions: 618144
Number of successful extensions: 1116
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)