Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_F09
(721 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.7
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 5.1
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 8.9
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 252 QHKKILSESPQAYYHPVLGIPLTASQVARGQTFSIPVPTS 371
+HK + P Y G P++ + A + S +P S
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLS 392
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 252 QHKKILSESPQAYYHPVLGIPLTASQVARGQTFSIPVPTS 371
+HK + P Y G P++ + A + S +P S
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLS 392
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 252 QHKKILSESPQAYYHPVLGIPLTASQVARGQTFSIPVPTS 371
+HK + P Y G P++ + A + S +P S
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLS 392
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 252 QHKKILSESPQAYYHPVLGIPLTASQVARGQTFSIPVPTS 371
+HK + P Y G P++ + A + S +P S
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLS 392
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 252 QHKKILSESPQAYYHPVLGIPLTASQVARGQTFSIPVPTS 371
+HK + P Y G P++ + A + S +P S
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLS 392
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 252 QHKKILSESPQAYYHPVLGIPLTASQVARGQTFSIPVPTS 371
+HK + P Y G P++ + A + S +P S
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLS 392
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 252 QHKKILSESPQAYYHPVLGIPLTASQVARGQTFSIPVPTS 371
+HK + P Y G P++ + A + S +P S
Sbjct: 421 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLS 460
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 252 QHKKILSESPQAYYHPVLGIPLTASQVARGQTFSIPVPTS 371
+HK + P Y G P++ + A + S +P S
Sbjct: 421 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLS 460
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -2
Query: 156 QYVKLIIARRRLYVRVLIST 97
+YV ++I R +LY+ L++T
Sbjct: 472 KYVAMVIDRLQLYIFFLVTT 491
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 8.9
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +2
Query: 509 DKSKSLTGKQRIPLRHLCKNYFII*VNYN*DLYVNK 616
DK + K+R + L NY NYN D NK
Sbjct: 69 DKRERERSKERKIISSLSNNYISNISNYNNDNNYNK 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,919
Number of Sequences: 438
Number of extensions: 4153
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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