Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_F07
(763 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 239 8e-63
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 239 8e-63
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 239 8e-63
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 239 8e-63
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 239 8e-63
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 239 8e-63
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 239 8e-63
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 239 8e-63
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 239 8e-63
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 239 8e-63
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 239 8e-63
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 239 8e-63
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 239 8e-63
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 239 8e-63
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 237 2e-62
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 236 7e-62
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 234 2e-61
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 140 4e-33
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 97 8e-20
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 97 8e-20
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 60 6e-09
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 38 0.052
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 38 0.052
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 38 0.052
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 38 0.052
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 38 0.052
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 38 0.052
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 3.4
L07518-1|AAB61945.1| 505|Homo sapiens mucin protein. 31 3.4
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 3.4
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 3.4
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 3.4
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 3.4
BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein. 31 4.5
AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo pr... 31 4.5
AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens ... 31 4.5
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 5.9
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 239 bits (585), Expect = 8e-63
Identities = 114/192 (59%), Positives = 140/192 (72%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 239 bits (585), Expect = 8e-63
Identities = 114/192 (59%), Positives = 140/192 (72%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 239 bits (585), Expect = 8e-63
Identities = 114/192 (59%), Positives = 140/192 (72%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 239 bits (585), Expect = 8e-63
Identities = 114/192 (59%), Positives = 140/192 (72%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 239 bits (585), Expect = 8e-63
Identities = 114/192 (59%), Positives = 140/192 (72%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 239 bits (585), Expect = 8e-63
Identities = 114/192 (59%), Positives = 140/192 (72%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 239 bits (585), Expect = 8e-63
Identities = 114/192 (59%), Positives = 140/192 (72%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 239 bits (585), Expect = 8e-63
Identities = 114/192 (59%), Positives = 140/192 (72%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 239 bits (585), Expect = 8e-63
Identities = 114/192 (59%), Positives = 140/192 (72%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 239 bits (585), Expect = 8e-63
Identities = 114/192 (59%), Positives = 140/192 (72%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 239 bits (585), Expect = 8e-63
Identities = 114/192 (59%), Positives = 140/192 (72%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 239 bits (585), Expect = 8e-63
Identities = 114/192 (59%), Positives = 140/192 (72%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 239 bits (585), Expect = 8e-63
Identities = 114/192 (59%), Positives = 140/192 (72%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 239 bits (585), Expect = 8e-63
Identities = 114/192 (59%), Positives = 140/192 (72%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 237 bits (581), Expect = 2e-62
Identities = 113/192 (58%), Positives = 140/192 (72%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L IGYPT+AS PHSI NG++ +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYERVLALSVETDYTFPLAEKVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 236 bits (577), Expect = 7e-62
Identities = 113/192 (58%), Positives = 139/192 (72%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSF QAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFSQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 234 bits (573), Expect = 2e-61
Identities = 112/192 (58%), Positives = 138/192 (71%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 404
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LD
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDKTE 208
Query: 403 EDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEF 224
E L ++F GV NVA++ L GYPT+AS PHSI NG+K +L +K F
Sbjct: 209 ETLHSRFLEGVRNVASVCLQTGYPTVASVPHSIINGYKRVLALSVETDYTFPLAENVKAF 268
Query: 223 IKDPSKFLQLLP 188
+ DPS F+ P
Sbjct: 269 LADPSAFVAAAP 280
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 140 bits (340), Expect = 4e-33
Identities = 66/119 (55%), Positives = 84/119 (70%)
Frame = -1
Query: 544 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVAN 365
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV N
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRN 61
Query: 364 VAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFLQLLP 188
VA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F+ P
Sbjct: 62 VASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAP 120
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 96.7 bits (230), Expect = 8e-20
Identities = 46/67 (68%), Positives = 51/67 (76%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 89 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 148
Query: 583 KGTIEII 563
+GTIEI+
Sbjct: 149 RGTIEIL 155
Score = 60.5 bits (140), Expect = 6e-09
Identities = 28/63 (44%), Positives = 36/63 (57%)
Frame = -1
Query: 376 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFLQ 197
GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F+
Sbjct: 156 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVA 215
Query: 196 LLP 188
P
Sbjct: 216 AAP 218
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 96.7 bits (230), Expect = 8e-20
Identities = 46/67 (68%), Positives = 51/67 (76%)
Frame = -1
Query: 763 VFTRGDXVEVRDKLLENKVQAPXXXGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 584
VFT+ D E+RD LL NKV A GAIAP V +PA NTGLGPEKTSFFQAL I TKIS
Sbjct: 88 VFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKIS 147
Query: 583 KGTIEII 563
+GTIEI+
Sbjct: 148 RGTIEIL 154
Score = 60.5 bits (140), Expect = 6e-09
Identities = 28/63 (44%), Positives = 36/63 (57%)
Frame = -1
Query: 376 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFLQ 197
GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F+
Sbjct: 155 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVA 214
Query: 196 LLP 188
P
Sbjct: 215 AAP 217
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 60.5 bits (140), Expect = 6e-09
Identities = 28/63 (44%), Positives = 36/63 (57%)
Frame = -1
Query: 376 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFLQ 197
GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F+
Sbjct: 1 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVA 60
Query: 196 LLP 188
P
Sbjct: 61 AAP 63
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.052
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -1
Query: 607 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 428
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 427 PEILDIKPE 401
++ D PE
Sbjct: 216 QQMGDDLPE 224
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.052
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -1
Query: 607 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 428
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 427 PEILDIKPE 401
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.052
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -1
Query: 607 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 428
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 427 PEILDIKPE 401
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.052
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -1
Query: 607 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 428
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 427 PEILDIKPE 401
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 37.5 bits (83), Expect = 0.052
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -1
Query: 607 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 428
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 427 PEILDIKPE 401
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.052
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -1
Query: 607 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 428
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 427 PEILDIKPE 401
++ D PE
Sbjct: 216 QQMGDDLPE 224
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 31.5 bits (68), Expect = 3.4
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 360 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 539
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 249 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 307
Query: 540 GFKMCTSL 563
G +S+
Sbjct: 308 GLSTSSSV 315
>L07518-1|AAB61945.1| 505|Homo sapiens mucin protein.
Length = 505
Score = 31.5 bits (68), Expect = 3.4
Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Frame = -2
Query: 750 ETSLRSVTNCWRTKSKLQXVXVPLPHCQS--SFPPTTPASVXXXXXXXXXXXXXXXXXRV 577
E + S TN KS + P+ H S S P TP +
Sbjct: 255 EVTPTSTTNV-TPKSTSRDTSTPVTHTTSATSSRPPTPITTHSSPTRSSPLSSTGPMTAT 313
Query: 576 LLKSSTMYTS*S-PVTRLELLKPPFSTC*TSLHSHMVL 466
+K++T Y + S P T L PPFST + +H V+
Sbjct: 314 SIKTTTTYPTPSHPQTTLTTHVPPFSTSSVTPSTHTVI 351
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 31.5 bits (68), Expect = 3.4
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 360 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 539
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 540 GFKMCTSL 563
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 31.5 bits (68), Expect = 3.4
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 360 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 539
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 540 GFKMCTSL 563
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 31.5 bits (68), Expect = 3.4
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 360 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 539
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 540 GFKMCTSL 563
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 31.5 bits (68), Expect = 3.4
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 360 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 539
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 540 GFKMCTSL 563
G +S+
Sbjct: 273 GLSTSSSV 280
>BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein.
Length = 568
Score = 31.1 bits (67), Expect = 4.5
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -1
Query: 526 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 350
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 282
>AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo
protein.
Length = 571
Score = 31.1 bits (67), Expect = 4.5
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -1
Query: 526 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 350
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 282
>AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ40219 fis, clone TESTI2021637, moderately
similar to LIVER CARBOXYLESTERASE PRECURSOR (EC
3.1.1.1). ).
Length = 207
Score = 31.1 bits (67), Expect = 4.5
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -1
Query: 526 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 350
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 85 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 139
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.7 bits (66), Expect = 5.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 444 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 563
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,528,089
Number of Sequences: 237096
Number of extensions: 2086793
Number of successful extensions: 4501
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 4333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4500
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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