Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_F06
(709 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 348 4e-97
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 265 5e-72
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 254 7e-69
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 253 2e-68
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 243 2e-65
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 230 2e-61
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 169 3e-43
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 169 3e-43
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 163 2e-41
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 163 2e-41
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 154 1e-38
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 140 2e-34
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 138 7e-34
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 137 2e-33
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 129 4e-31
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 129 4e-31
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 122 5e-29
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 113 2e-26
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 112 4e-26
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 104 1e-23
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 69 9e-13
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 38 0.001
SPCC1442.07c |||ubiquitin/metalloprotease fusion protein|Schizos... 31 0.21
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 29 0.49
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.65
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 29 0.65
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 0.86
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 29 0.86
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 1.1
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 28 1.5
SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|... 27 2.6
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 3.5
SPBC216.06c |swi1||replication fork protection complex subunit S... 27 3.5
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 3.5
SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces pomb... 26 4.6
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 4.6
SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces po... 26 6.1
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 6.1
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 25 8.0
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 25 8.0
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 25 8.0
SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription fact... 25 8.0
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 348 bits (856), Expect = 4e-97
Identities = 173/222 (77%), Positives = 193/222 (86%), Gaps = 2/222 (0%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
GVILYG PGTG TLLAKAVANQTSATFLRVVGSELIQKYLGDGP+LVR+LF AEEH+PS
Sbjct: 227 GVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPS 286
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIETLDP 351
IVFIDEIDA+GTKRYD+ SG EREIQRTMLELLNQLDGFD S+ D+KVIMATNRI LDP
Sbjct: 287 IVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDP 346
Query: 350 ALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAIC 171
ALIRPGRIDRKI F PDE TKR+IFTIHTS+M L +DVNL ELI KDDLSGA+IKAI
Sbjct: 347 ALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIV 406
Query: 170 TEAGLMALRERRMKVTNEDFKKSKESVLYRKKEGTPE-GLYL 48
+EAGL+ALRERRM+V +DF++++E VL K EG P GLY+
Sbjct: 407 SEAGLLALRERRMRVVMDDFRQAREKVLKTKDEGGPAGGLYI 448
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 265 bits (649), Expect = 5e-72
Identities = 123/214 (57%), Positives = 163/214 (76%), Gaps = 1/214 (0%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
G++LYGPPGTG TLLA+AVA+ T F+RV GSEL+QKY+G+G ++VRELF +A EHAPS
Sbjct: 181 GILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 240
Query: 527 IVFIDEIDAVGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 351
I+F+DEID++G+ R DS+ G G+ E+QRTMLELLNQLDGF++ ++KVIMATNRI+ LDP
Sbjct: 241 IIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDP 300
Query: 350 ALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAIC 171
AL+RPGRIDRKIEFP P + + I IH+ M L ++L + + SGA++K +C
Sbjct: 301 ALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVC 360
Query: 170 TEAGLMALRERRMKVTNEDFKKSKESVLYRKKEG 69
TEAG+ ALRERR+ VT EDF+ + VL + G
Sbjct: 361 TEAGMFALRERRVHVTQEDFELAVAKVLNKGDSG 394
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 254 bits (623), Expect = 7e-69
Identities = 115/212 (54%), Positives = 161/212 (75%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
G +++GPPGTG TLLA+A A Q++ATFL++ +L+Q ++GDG KLVR+ F +A+E +P+
Sbjct: 221 GCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPA 280
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 348
I+FIDE+DA+GTKR+DS G+RE+QRTMLELLNQLDGF S VKVI ATNR++TLDPA
Sbjct: 281 IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPA 340
Query: 347 LIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICT 168
L+R GR+DRK+EFPLP+E+ + I IH+ +M + DD+N EL S D+ +GA +K++C
Sbjct: 341 LLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCV 400
Query: 167 EAGLMALRERRMKVTNEDFKKSKESVLYRKKE 72
EAG++ALR+ K+ +E F V RK +
Sbjct: 401 EAGMIALRQGDTKINHEHFMDGILEVQMRKSK 432
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 253 bits (619), Expect = 2e-68
Identities = 116/203 (57%), Positives = 159/203 (78%), Gaps = 1/203 (0%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
GV+LYGPPGTG T+L KAVAN T+A F+RVVGSE +QKYLG+GP++VR++FR+A E+AP+
Sbjct: 170 GVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPA 229
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 348
I+FIDEIDA+ TKR+D+ +G +RE+QR ++ELL Q+DGFD +VKVIMATNR +TLDPA
Sbjct: 230 IIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPA 289
Query: 347 LIRPGRIDRKIEFP-LPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAIC 171
L+RPGR+DRKIEFP D + +R +F T++M L+ +V+L IM D SGA I AI
Sbjct: 290 LLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIM 349
Query: 170 TEAGLMALRERRMKVTNEDFKKS 102
+AGL+A+R+ R + D +++
Sbjct: 350 QDAGLLAVRKSRGVILQSDIEEA 372
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 243 bits (595), Expect = 2e-65
Identities = 112/224 (50%), Positives = 157/224 (70%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
G++LYGPPGTG TL A+AVAN+T ATF+RV+GSEL+QKY+G+G ++VRELF +A
Sbjct: 215 GIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKAC 274
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 348
I+F DEIDA+G R+D +GG+ E+QRTMLEL+ QLDGFD RG++KV+ ATNR TLD A
Sbjct: 275 IIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEA 334
Query: 347 LIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICT 168
L+RPGRIDRK+EF LPD + + I IH M + D+ + +GA+++++CT
Sbjct: 335 LMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCT 394
Query: 167 EAGLMALRERRMKVTNEDFKKSKESVLYRKKEGTPEGLYL*MXS 36
EAG+ A+R RR T +DF + + V+ ++ + Y+ M S
Sbjct: 395 EAGMFAIRARRRVATEKDFLDAVQKVVKGNQKFSSTADYMNMSS 438
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 230 bits (562), Expect = 2e-61
Identities = 105/215 (48%), Positives = 149/215 (69%), Gaps = 1/215 (0%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
GV+LYGPPGTG TLLA+AVA FL+VV S ++ KY+G+ +++RE+F A+EH P
Sbjct: 168 GVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPC 227
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 348
++F+DEIDA+G +R+ + +REIQRT++ELLNQ+DGFD G K+IMATNR +TLDPA
Sbjct: 228 VIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPA 287
Query: 347 LIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICT 168
L+RPGR+DRKIE PLP+E + I IH +++ +++ L+ D +GAD++ + T
Sbjct: 288 LLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVT 347
Query: 167 EAGLMALRERRMKVTNEDFKKSKESVLYRKK-EGT 66
EAG +A++E R V D + V KK EGT
Sbjct: 348 EAGFIAIKEDRDYVIQSDLMSAARKVADLKKLEGT 382
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 169 bits (412), Expect = 3e-43
Identities = 89/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
G IL GPPGTG TLLAKA A + + FL V GSE ++ ++G GP VR+LF A ++AP
Sbjct: 331 GAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPC 390
Query: 527 IVFIDEIDAVGTKR-YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 351
I+FIDEIDA+G R G E + T+ +LL ++DGF S + V TNR + LDP
Sbjct: 391 IIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDP 450
Query: 350 ALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNL--SELIMSKDDLSGADIKA 177
AL+RPGR DR+I PD + +IF +H + AD+++L L + +GADI
Sbjct: 451 ALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMN 510
Query: 176 ICTEAGLMALRERRMKVTNEDFKKSKESV 90
+C E L+A R +V F+++ E V
Sbjct: 511 VCNEGALIAARSNSNEVQMVHFEQAIERV 539
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 169 bits (412), Expect = 3e-43
Identities = 81/190 (42%), Positives = 126/190 (66%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
G+++YGPPGTG TL+A+AVAN+T A F + G E++ K G+ +R+ F AE+++P+
Sbjct: 260 GILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPA 319
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 348
I+FIDEID++ KR +N GE E +R + +LL +DG +R +V V+ ATNR ++DPA
Sbjct: 320 IIFIDEIDSIAPKREKTN--GEVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPA 376
Query: 347 LIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICT 168
L R GR DR+++ +PD + I IHT M LADDV+L ++ G+D+ ++C+
Sbjct: 377 LRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCS 436
Query: 167 EAGLMALRER 138
EA + +RE+
Sbjct: 437 EAAMQQIREK 446
Score = 156 bits (378), Expect = 3e-39
Identities = 80/205 (39%), Positives = 126/205 (61%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
GV+ +GPPGTG TLLAKA+AN+ SA F+ V G EL+ + G+ VR++F A AP
Sbjct: 533 GVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPC 592
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 348
+VF+DE+D++ R +++G R + +LL ++DG +S+ +V VI ATNR + +DPA
Sbjct: 593 VVFLDELDSIAKAR-GASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPA 651
Query: 347 LIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICT 168
L+RPGR+D+ I PLPDE+ + I +A+DV+L + + SGAD++ +
Sbjct: 652 LMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQ 711
Query: 167 EAGLMALRERRMKVTNEDFKKSKES 93
A +A+++ ED K+ E+
Sbjct: 712 RAVKLAIKDS----IEEDIKRENET 732
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 163 bits (397), Expect = 2e-41
Identities = 78/189 (41%), Positives = 122/189 (64%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
GV+LYGPPG T+ AKA+A +T F+ V G EL K++G+ + VR++F+ A + +PS
Sbjct: 584 GVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPS 643
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 348
++F DEIDA+ R + NS R + LLN+LDG ++ +V V+ ATNR + +DPA
Sbjct: 644 VIFFDEIDALTANRGEDNSS-----DRVVAALLNELDGIEALRNVLVLAATNRPDMIDPA 698
Query: 347 LIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICT 168
L+RPGR+DR + P+ + +++I I +M A+DV+L + + SGA++ A+C
Sbjct: 699 LMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQ 758
Query: 167 EAGLMALRE 141
EAGL+A+ E
Sbjct: 759 EAGLIAMHE 767
Score = 140 bits (339), Expect = 2e-34
Identities = 76/189 (40%), Positives = 111/189 (58%), Gaps = 1/189 (0%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
GV+LYGPPGTG T++ +AVA + +A + G ++ KYLG+ +R++F A H PS
Sbjct: 315 GVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPS 374
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 348
I+FIDEIDA+ KR + S E R + LL LDG + G V VI ATNR ++D A
Sbjct: 375 IIFIDEIDALAPKRTEDVSEAE---SRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEA 431
Query: 347 LIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRM-TLADDVNLSELIMSKDDLSGADIKAIC 171
L RPGR++++IE +PD+ + I + S + +D L +L GAD+ A+
Sbjct: 432 LRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVV 491
Query: 170 TEAGLMALR 144
EA L A++
Sbjct: 492 REAALRAIK 500
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 163 bits (396), Expect = 2e-41
Identities = 90/211 (42%), Positives = 125/211 (59%), Gaps = 4/211 (1%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
GV+L GPPGTG T+LA+AVA + + F + GS+ + Y+G G K VRELF A + APS
Sbjct: 302 GVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPS 361
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGD----VKVIMATNRIET 360
I+FIDE+DA+G KR N+ +++T+ +LL LDGF D V I ATN E+
Sbjct: 362 IIFIDELDAIGQKR---NARDAAHMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPES 418
Query: 359 LDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIK 180
LDPAL RPGR DR I PLPD + + I HT + L DV+LS + +GAD+
Sbjct: 419 LDPALTRPGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLA 478
Query: 179 AICTEAGLMALRERRMKVTNEDFKKSKESVL 87
+ +A + A + V+ D + SK+ +L
Sbjct: 479 NLINQAAVYASKNLSTAVSMRDLEWSKDRIL 509
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 779
Score = 154 bits (374), Expect = 1e-38
Identities = 81/190 (42%), Positives = 117/190 (61%), Gaps = 2/190 (1%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
GV+L+GPPG G TLLAKAVAN++ A F+ + G EL+ KY+G+ + VR++F A +P
Sbjct: 528 GVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPC 587
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 348
++F DE+DA+ +R DS S + T LL +LDG R V VI ATNR + +DPA
Sbjct: 588 VIFFDELDAMVPRRDDSLSEASSRVVNT---LLTELDGLSDRSGVYVIAATNRPDIIDPA 644
Query: 347 LIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSK--DDLSGADIKAI 174
++RPGR+D+ + LPD + I T + L ++VNL L + + SGAD+ A+
Sbjct: 645 MLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAAL 704
Query: 173 CTEAGLMALR 144
EA + ALR
Sbjct: 705 VREAAVTALR 714
Score = 128 bits (309), Expect = 8e-31
Identities = 70/189 (37%), Positives = 106/189 (56%), Gaps = 1/189 (0%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
GV+L+GPPG G T+LA A+AN+ F+ + ++ G+ K VRE+F A+ AP
Sbjct: 210 GVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPC 269
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG-DVKVIMATNRIETLDP 351
++FIDEIDAV KR + ER I L +++L + G V VI ATNR ++LD
Sbjct: 270 LMFIDEIDAVTPKRESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDS 329
Query: 350 ALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAIC 171
AL R GR DR+I +P + + +I + L+ D + +L GAD+KA+
Sbjct: 330 ALRRAGRFDREICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALT 389
Query: 170 TEAGLMALR 144
AG++A++
Sbjct: 390 AAAGIIAIK 398
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 140 bits (338), Expect = 2e-34
Identities = 82/195 (42%), Positives = 113/195 (57%), Gaps = 7/195 (3%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVA------NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 546
GV+ +GPPGTG TL+A+ +A NQ + FLR GS+ + K++G+ + +R LF A
Sbjct: 408 GVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLRK-GSDCLSKWVGEAERQLRLLFEEA 466
Query: 545 EEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 366
PSI+F DEID + R I T+L L+ DG D+RG V VI ATNR
Sbjct: 467 RRVQPSIIFFDEIDGLAPIRSSKQEQTHSSIVSTLLALM---DGLDTRGQVVVIGATNRP 523
Query: 365 ETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMT-LADDVNLSELIMSKDDLSGA 189
LDPAL RPGR DR+ FPLP+++ + +I I++ + + L L S GA
Sbjct: 524 NDLDPALRRPGRFDREFYFPLPNKQARMKILEINSLHFSPKIPESYLLHLAESTSGYGGA 583
Query: 188 DIKAICTEAGLMALR 144
D+KA+CTEA L A+R
Sbjct: 584 DLKALCTEAALNAVR 598
Score = 31.5 bits (68), Expect = 0.12
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -3
Query: 683 GTGXTLLAKAVANQTSATFLRVVG-SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 507
G G T L+K + + ++ + SEL+ L+ ++F A ++APSI+FI+ +
Sbjct: 716 GYGCTYLSKVLFSMLDGIHVQSLDISELLMDTTTSPRSLLTKIFSEARKNAPSIIFINNV 775
Query: 506 D 504
+
Sbjct: 776 E 776
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 138 bits (334), Expect = 7e-34
Identities = 76/194 (39%), Positives = 112/194 (57%), Gaps = 6/194 (3%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSA-----TFLRVVGSELIQKYLGDGPKLVRELFRVAE 543
GV+ +GPPGTG TL+A+A+A S+ +F G++ + K++G+ + +R LF A+
Sbjct: 302 GVLFHGPPGTGKTLMARALAAACSSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAK 361
Query: 542 EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 363
PSI+F DEID + R I T+L L+ DG +SRG V +I ATNR +
Sbjct: 362 STQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLALM---DGMESRGQVIIIGATNRPD 418
Query: 362 TLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKD-DLSGAD 186
+DPAL RPGR DR+ FPLPD +++I IHT L ++ K GAD
Sbjct: 419 AVDPALRRPGRFDREFYFPLPDRDARKKIIEIHTRNWDPPVPEWLCSMLAEKSKGYGGAD 478
Query: 185 IKAICTEAGLMALR 144
++A+CTEA L +++
Sbjct: 479 LRALCTEAALNSIK 492
Score = 31.1 bits (67), Expect = 0.16
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -3
Query: 701 ILYGPPGTGXTLLAKAVANQTSATFLRVVG-SELIQKYLGDGPKLVRELFRVAEEHAPSI 525
++ G G G T L A+ Q ++ S L+Q + LF H PSI
Sbjct: 606 LICGRKGLGQTALGPAILQQYEGVHVQSFDMSTLLQDSTQSIETSIIHLFLEVRRHTPSI 665
Query: 524 VFIDEID 504
++I +ID
Sbjct: 666 IYIPDID 672
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 137 bits (331), Expect = 2e-33
Identities = 73/198 (36%), Positives = 120/198 (60%), Gaps = 4/198 (2%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
GV+LYGPPGTG TLLAKAVA + S F+ + G EL+ Y+G+ VR +F A +P
Sbjct: 690 GVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPC 749
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGF--DSRGDVKVIMATNRIETLD 354
++F DE+D++ R +S+ G + R + +LL +LD D+ V VI ATNR + LD
Sbjct: 750 VIFFDELDSIAPHRGNSSDSG-NVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLD 808
Query: 353 PALIRPGRIDRKIEFPL-PDEKTKRRIFTIHTSRMTLADDVNLSELIMS-KDDLSGADIK 180
P+L+RPGR D+ + + E++K + T L + ++L+E+ + + +GAD+
Sbjct: 809 PSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMY 868
Query: 179 AICTEAGLMALRERRMKV 126
A+C++A L A++ + ++
Sbjct: 869 ALCSDAVLSAIKRKTNEI 886
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 129 bits (311), Expect = 4e-31
Identities = 72/189 (38%), Positives = 112/189 (59%), Gaps = 1/189 (0%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
G++LYGPPGTG + LAKAVA + +TF + S+L+ K++G+ +LVR+LF +A E PS
Sbjct: 164 GILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPS 223
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 348
I+FIDEID++ R + S R I+ L +N + G D G V V+ ATN TLD A
Sbjct: 224 IIFIDEIDSLCGSRSEGESESSRRIKTEFLVQMNGV-GKDESG-VLVLGATNIPWTLDSA 281
Query: 347 LIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRM-TLADDVNLSELIMSKDDLSGADIKAIC 171
+ R R +++I PLP+ + R+F ++ ++ + + EL D SG+DI +
Sbjct: 282 IRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVV 339
Query: 170 TEAGLMALR 144
+A + +R
Sbjct: 340 RDAIMEPVR 348
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 129 bits (311), Expect = 4e-31
Identities = 79/208 (37%), Positives = 120/208 (57%), Gaps = 14/208 (6%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVV-GSELIQKYLGDGPKLVRELFRVAE---- 543
G++LYGPPGTG TL+A+ + +A ++V G E++ KY+G + VR+LF AE
Sbjct: 306 GILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEENVRKLFADAEREYR 365
Query: 542 ----EHAPSIVFIDEIDAVGTKRYDSNSGGEREI-QRTMLELLNQLDGFDSRGDVKVIMA 378
E I+ DE+DA+ KR +SGG+ + + + +LL ++DG D ++ VI
Sbjct: 366 DRGEESGLHIIIFDELDAICKKR--GSSGGDTGVGDQVVNQLLAKMDGVDQLNNILVIGM 423
Query: 377 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMT----LADDVNLSELIMS 210
TNR + +D AL+RPGR++ +E LPDE + +I IHTSRM L +DV++ EL
Sbjct: 424 TNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASL 483
Query: 209 KDDLSGADIKAICTEAGLMALRERRMKV 126
+ SGA+I + A A R +KV
Sbjct: 484 TKNFSGAEIAGLIKSASSFAF-YRHIKV 510
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 122 bits (294), Expect = 5e-29
Identities = 63/195 (32%), Positives = 112/195 (57%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
G++L+G PG G T LA A+++ F+ + G EL+ KY+G + VR+LF A+ P
Sbjct: 642 GILLFGYPGCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPC 701
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 348
++F DE D+V +R ++G R + ++L Q+DG +S V ++ AT R + +DPA
Sbjct: 702 VLFFDEFDSVAPRRGQDSTG---VTDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPA 758
Query: 347 LIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICT 168
L+RPGR+D+ I LP+E+ + + +R + + L +L D + AD+ ++
Sbjct: 759 LLRPGRLDKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLSTLTDGYTYADLSSLLY 818
Query: 167 EAGLMALRERRMKVT 123
+A L+A+ + +V+
Sbjct: 819 DAHLIAVHKLLKRVS 833
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 113 bits (273), Expect = 2e-26
Identities = 74/200 (37%), Positives = 110/200 (55%), Gaps = 12/200 (6%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
G++L+GPPGTG T+LA+AVA + ATF + S L KYLGD KLVR LF VA+ S
Sbjct: 414 GMLLFGPPGTGKTMLARAVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTCS 473
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTM-LELLNQLDGFDSRGD---------VKVIMA 378
++F+DEID++ + R D SG E E R + E L Q + V V+ A
Sbjct: 474 VIFVDEIDSILSARND--SGNEHESSRRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVLAA 531
Query: 377 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFT--IHTSRMTLADDVNLSELIMSKD 204
TN +D A R R ++ PLP+++T+ + + +H L ++ +L EL+ +
Sbjct: 532 TNLPWCIDEAARR--RFVKRTYIPLPEKETRYKHLSHLLHNQVHCLTEE-DLEELVNLTE 588
Query: 203 DLSGADIKAICTEAGLMALR 144
SG+DI A+ +A + LR
Sbjct: 589 GYSGSDITALAKDAAMGPLR 608
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 112 bits (270), Expect = 4e-26
Identities = 66/189 (34%), Positives = 108/189 (57%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
G++LYGPPG G T+LAKA+A Q+ ATF+ V L K+ G+ KLV LF +A + P+
Sbjct: 127 GLLLYGPPGCGKTMLAKALAKQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLEPT 186
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 348
I+FIDEID +R ++ +I+ + + + L SR V V+ ATNR +D A
Sbjct: 187 IIFIDEIDTFLRQRQRTDHEAMAQIKAEFMSMWDGLLSGQSR--VLVLGATNRPADIDEA 244
Query: 347 LIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICT 168
+ R R+ + PLP+ + +R+I ++ ++ L + + + ++ + LSG+ IK +C
Sbjct: 245 IRR--RMPKVFSIPLPNAEQRRKILELYLKKVPLEANFDWNGVVNATAGLSGSYIKEVCR 302
Query: 167 EAGLMALRE 141
A + RE
Sbjct: 303 SALSVPRRE 311
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 104 bits (249), Expect = 1e-23
Identities = 72/202 (35%), Positives = 111/202 (54%), Gaps = 14/202 (6%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
G++L+GPPGTG T+LA+AVA ++ + F + S L K+LG+ KLVR LF +A++ +PS
Sbjct: 494 GMLLFGPPGTGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPS 553
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTM-LELLNQLDGF----DSRGD-----VKVIMA 378
I+F+DEID++ + R S+ G E E R + E L Q SR V V+ A
Sbjct: 554 IIFVDEIDSLLSAR--SSDGNEHETSRRIKTEFLIQWSSLARAAASRQTADHPRVLVLAA 611
Query: 377 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKR----RIFTIHTSRMTLADDVNLSELIMS 210
TN +D A R R R+ PLPDE T+R + ++L D + ++ +
Sbjct: 612 TNLPWCIDDAARR--RFVRRTYIPLPDETTRRLHLNNLLKYQKHSLSLED---IEAIVKA 666
Query: 209 KDDLSGADIKAICTEAGLMALR 144
+ SG+D+ A+ +A + LR
Sbjct: 667 TEYYSGSDLTALAKDAAMGPLR 688
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 68.5 bits (160), Expect = 9e-13
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 1/169 (0%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 528
G +LYGPPG+G T A+A + + L +K L D +L L V + +
Sbjct: 244 GYLLYGPPGSGKTSFLYALAGELDYDICVL---NLAEKGLTDD-RLNHLLSNVPPK---A 296
Query: 527 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 348
+V ++++D+ R S G T LLN LDG S + + M TN E LDPA
Sbjct: 297 VVLLEDVDSAFQGRERSGEVGFHA-NVTFSGLLNALDGVTSSDERIIFMTTNHPEKLDPA 355
Query: 347 LIRPGRIDRKIEFPLPDEKTKRRIFT-IHTSRMTLADDVNLSELIMSKD 204
L+RPGR+D K + R +FT + +ADD LS+++ K+
Sbjct: 356 LVRPGRVDVKAYLGNATPEQVREMFTRFYGHSPEMADD--LSDIVCPKN 402
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 38.3 bits (85), Expect = 0.001
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Frame = -3
Query: 698 LYGPPGTGXTLLAKAVANQTSATFLRV-VG-----SEL---IQKYLGDGP-KLVRELFRV 549
L GPPG G T + K++A+ + F R VG +E+ + Y+G P K+V+ L +V
Sbjct: 576 LVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTYIGAMPGKIVQALKKV 635
Query: 548 AEEHAPSIVFIDEIDAVGTKRYDSNSGGEREI---QRTMLELLNQLDGFDSRGDVKVIMA 378
E+ ++ IDEID VG + E+ ++ L +D V +
Sbjct: 636 QTEN--PLILIDEIDKVGKSHQGDPASALLELLDSEQNSAFLDYYMDIPLDVSSVLFVCT 693
Query: 377 TNRIETLDPALI 342
N I+T+ P L+
Sbjct: 694 ANTIDTIPPPLL 705
>SPCC1442.07c |||ubiquitin/metalloprotease fusion
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 282
Score = 30.7 bits (66), Expect = 0.21
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -3
Query: 554 RVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 375
++ + H ++ + E+D R+DS + G Q +EL + D +D D K + +T
Sbjct: 140 KIMDSHRWTVPLLSEMDPAEHTRHDSKTLGLNHNQGAHIELRLRTDRYDGFRDYKTVKST 199
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 29.5 bits (63), Expect = 0.49
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 704 VILYGPPGTGXTLLAKAVANQTSATFLRV 618
+IL+G GTG T LA+ +A T + F+ +
Sbjct: 123 MILWGSAGTGKTTLARLIAVTTKSRFIEI 151
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 29.1 bits (62), Expect = 0.65
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Frame = -3
Query: 701 ILYGPPGTGXTLLAKAV----------ANQTSATFLRV-VGSELI-QKYLGDGPKLVREL 558
+L G PG G T +A+ + AN ++ L + VGS + K+ G+ + ++ +
Sbjct: 206 VLIGEPGVGKTSIAEGLARRIIDDDVPANLSNCKLLSLDVGSLVAGSKFRGEFEERIKSV 265
Query: 557 FR-VAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 381
+ V E P I+F+DE+ + + SGGE ++ N L +RG + I
Sbjct: 266 LKEVEESETPIILFVDEMHLL----MGAGSGGEGG-----MDAANLLKPMLARGKLHCIG 316
Query: 380 ATNRIE 363
AT E
Sbjct: 317 ATTLAE 322
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = -3
Query: 692 GPPGTGXTLLAKAVAN---QTSATFLRVVGSELIQKY 591
GP GTG TLL KA+A+ +R+ SE ++K+
Sbjct: 621 GPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKH 657
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 29.1 bits (62), Expect = 0.65
Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 3/175 (1%)
Frame = -3
Query: 704 VILYGPPGTGXTLLAKAVANQTSATFLRVVGSELIQKYLGD--GPKLVRELFRVAEEHAP 531
++ YGPPGTG T A A + R ++L++ D G VRE ++ +
Sbjct: 59 MLFYGPPGTGKTSTILACARKIYGPNYR---NQLMELNASDDRGIDAVRE--QIKNFAST 113
Query: 530 SIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 351
+F + D+ + + R ++E + +V+ + N I + P
Sbjct: 114 RQIFASTFKMIILDEADAMTLAAQNALRRVIEKYTK--------NVRFCIICNYINKISP 165
Query: 350 ALIRPGRIDRKIEFPLPDEKTKRRI-FTIHTSRMTLADDVNLSELIMSKDDLSGA 189
A+ R R PLP ++ ++ + I + + D ++ L +SK D+ A
Sbjct: 166 AI--QSRCTRFRFQPLPPKEIEKTVDHVIQSEHCNIDPDAKMAVLRLSKGDMRKA 218
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.7 bits (61), Expect = 0.86
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -3
Query: 704 VILYGPPGTGXTLLAKAVANQTSATFLRVVGSEL--IQKYLG 585
+++ GP +G T + + VA +T F+R+ E +Q+Y+G
Sbjct: 897 ILIQGPTSSGKTSMIEYVAKKTGHKFVRINNHEHTDLQEYIG 938
Score = 27.1 bits (57), Expect = 2.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 704 VILYGPPGTGXTLLAKAVANQTSATFLRV 618
++L G PG G T L A+A +T +R+
Sbjct: 1562 ILLEGSPGVGKTSLITALARETGHQLVRI 1590
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 28.7 bits (61), Expect = 0.86
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -3
Query: 707 GVILYGPPGTGXTLLAKAVANQ--TSATFLRVVGSEL 603
GV+ G GTG T LA A+A + F +VGSE+
Sbjct: 66 GVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEV 102
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 346 SAGSKVSIRFVAMITFTSPLESKPSS*FNNSNMVL*ISLSPPEFE-S*RLVPTASISSMK 522
++ S VS++ + + +SP+ S + + S L S++P + L+P++S
Sbjct: 546 TSNSSVSLQTSSSLIISSPIISSSLTATSTSTPALTHSITPSNTSYTSSLIPSSSTDYSS 605
Query: 523 TIEGACSSATRNSSRTNL 576
++ CS+ T S T+L
Sbjct: 606 SLITVCSNVTSEISSTSL 623
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 704 VILYGPPGTGXTLLAKAVANQT 639
+I+ G PGTG T LA+ VA T
Sbjct: 11 IIICGTPGTGKTTLAEQVAETT 32
>SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = -3
Query: 608 ELIQKYLG---DGPKLVRELFRVAEEHA---PSIVFIDEIDAVGTKRYDSNSGGEREIQR 447
E I KY G +GP ++R+ A++ P V +D +GTK +D + E+E
Sbjct: 228 EYINKYRGRYSEGPDVLRKNRLQAQKDLGLIPENVIPAPVDGMGTKSWDELTTEEKEFSA 287
Query: 446 TMLEL 432
+E+
Sbjct: 288 RTMEV 292
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 3.5
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 3/166 (1%)
Frame = +1
Query: 85 YRTLSFDFLKSSFVTFIRRSLSAMRPASVHIALISAPERSSFDIISSDKFTSSANVILDV 264
Y T SF L SS ++ S S++ P S+ I S P S +SS + S N+
Sbjct: 223 YNTSSF--LPSSVISSASLSSSSVLPTSI-ITSTSTPVTVSSSSLSSFTPSYSTNLTTTG 279
Query: 265 *MVKILLLVFSSG---KGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESKPSS*FNN 435
SS +S+ + P +S+ + S + +T ++ + + +
Sbjct: 280 STTTTGSATVSSSPFYSNSSVIPTSVPSSVSSFTSSSSSYTTTLTASNTSVTYTGTGTGS 339
Query: 436 SNMVL*ISLSPPEFES*RLVPTASISSMKTIEGACSSATRNSSRTN 573
+ + SPP + + ++PT+ SS+ + + SS T + +N
Sbjct: 340 ATF----TSSPPFYSNSSVIPTSVPSSVSSFTSSNSSYTTTLTASN 381
>SPBC216.06c |swi1||replication fork protection complex subunit
Swi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 971
Score = 26.6 bits (56), Expect = 3.5
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -3
Query: 293 KTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNED 114
KT I HT+R + + ++ I+ DD S DI +EA ALRE+ + +
Sbjct: 890 KTNETIID-HTTRKKKENHLRSAKYIVDSDDDSETDIAFFQSEA---ALREKNAQKASAL 945
Query: 113 FKK 105
FK+
Sbjct: 946 FKR 948
>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 486
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 105 FLEVLICYFHTALSKCHETSFSTYCLNISTRKIIF*HNKFRQV 233
FL + +H + KC ETS +C+ + R HN+ R++
Sbjct: 268 FLHIFELRYHIMIKKCLETS-KRFCIAMPLRARSDGHNEHREL 309
>SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 26.2 bits (55), Expect = 4.6
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 505 SISSMKTIEGACSSATRNSSRTNLGPSPKYFCISS 609
S S++ + + S + N+ R+ +GP +FC+S+
Sbjct: 319 SHSALNNLHKSESGTSLNNRRSKVGPGSCFFCLSN 353
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.2 bits (55), Expect = 4.6
Identities = 46/177 (25%), Positives = 71/177 (40%)
Frame = +1
Query: 55 SPSGVPSFLRYRTLSFDFLKSSFVTFIRRSLSAMRPASVHIALISAPERSSFDIISSDKF 234
S S PS + RT S F+ SS T P+S + S+P SS SS K
Sbjct: 129 STSIAPSMIGTRTSSSYFITSSSST----------PSSSSSSSSSSPSSSSSKSSSSSKS 178
Query: 235 TSSANVILDV*MVKILLLVFSSGKGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESK 414
+SS++ SS +S S P + SK S + IT T+P S
Sbjct: 179 SSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSS--SFITSTTPASSS 236
Query: 415 PSS*FNNSNMVL*ISLSPPEFES*RLVPTASISSMKTIEGACSSATRNSSRTNLGPS 585
S +V + + S T+S+SS+ + + SA+ +S+ ++ S
Sbjct: 237 SS-----GAIVSNAKTASTDDSSSASSATSSVSSVVSSASSALSASASSASASVSSS 288
>SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 245 LMSFLMYEW*KSFSWFSRQARG 310
L+SFL+Y+ K+F W Q G
Sbjct: 172 LLSFLVYKMNKAFGWIMYQQHG 193
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 559 CSVLLRNMHLQLFSLMKLMQWALNVM 482
C++L RN+HL+ FS LNV+
Sbjct: 4084 CNILYRNVHLEEFSWGTFKDLLLNVV 4109
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 25.4 bits (53), Expect = 8.0
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -3
Query: 224 ELIMSKDDLSGADIKAICTEAGLMALRER----RMKVTNEDFKKSKESVLYRKKEGTPEG 57
+L + + + K+ E+ L L E R+K NED +K++ L RK E E
Sbjct: 35 QLSLKEQEYESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEE 94
Query: 56 L 54
L
Sbjct: 95 L 95
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 704 VILYGPPGTGXTLLAKAVANQTSA-TFLRVVG 612
V + GPPGTG + L K++ + S T ++ G
Sbjct: 77 VAVMGPPGTGKSTLIKSLVRRYSKYTISQITG 108
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 25.4 bits (53), Expect = 8.0
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -3
Query: 701 ILYGPPGTGXTLLAKAVANQTSATFL 624
++ GP G+G T +AKAV+ + ++
Sbjct: 18 VVIGPAGSGKTTMAKAVSEKLGFEYI 43
>SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription factor
Grt1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 648
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -3
Query: 494 TKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIET 360
+K+Y NS + M +L FD D K TNR ET
Sbjct: 574 SKKYQDNSVNNTYFDKVMQHVLVHSPAFDDSSDPK--FETNRSET 616
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,986,664
Number of Sequences: 5004
Number of extensions: 63439
Number of successful extensions: 264
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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