Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_F05
         (665 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   3.7  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    23   6.5  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -1

Query: 650 AVLLCGDVHTFIPDKPLEIKWIKMCLNKFKKAYRRCQTKICY-VQKLYFELTS 495
           A ++C  V    P+ P   + +K      + AYR  QT+ C   + +YF+  S
Sbjct: 390 AFVVCVPVQRPKPNPPWADRTLKRLKRVKRAAYRHYQTRRCQRSRSIYFDTHS 442


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -1

Query: 596 IKWIKMC-LNKFKKAYRRCQTKICYVQKLYFELTSKNVFV 480
           ++ I +C ++K     RRC  ++   Q+  + L  +++FV
Sbjct: 96  VQVIALCSISKIPSCARRCLLEVIATQEYLYYLNIEHIFV 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,502
Number of Sequences: 2352
Number of extensions: 14217
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)