Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_F03
         (816 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical pr...    39   0.004
X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP translo...    39   0.004
Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical pr...    38   0.006
U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical pr...    38   0.006
AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical ...    34   0.11 
U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical pr...    29   3.0  

>Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical
           protein T27E9.1a protein.
          Length = 300

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = -1

Query: 816 SNVLRGTGGAFVLVLYDEIKKVL 748
           SNV RGTGGA VL +YDEI+K L
Sbjct: 278 SNVFRGTGGALVLAIYDEIQKFL 300


>X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP
           translocase protein.
          Length = 300

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = -1

Query: 816 SNVLRGTGGAFVLVLYDEIKKVL 748
           SNV RGTGGA VL +YDEI+K L
Sbjct: 278 SNVFRGTGGALVLAIYDEIQKFL 300


>Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical
           protein K01H12.2 protein.
          Length = 313

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = -1

Query: 816 SNVLRGTGGAFVLVLYDEIKKVL 748
           SNV RGTGGA VL +YDEI+K +
Sbjct: 291 SNVFRGTGGALVLAIYDEIQKFI 313


>U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical
           protein T01B11.4 protein.
          Length = 313

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = -1

Query: 816 SNVLRGTGGAFVLVLYDEIKKVL 748
           SNV RGTGGA VL +YDEI+K +
Sbjct: 291 SNVFRGTGGALVLAIYDEIQKFI 313


>AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical
           protein W02D3.6 protein.
          Length = 300

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -1

Query: 816 SNVLRGTGGAFVLVLYDEIKKVL 748
           SNV R TGGA VL +YDEI+ ++
Sbjct: 278 SNVFRATGGALVLTIYDEIQHLI 300


>U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical
           protein F25B4.7 protein.
          Length = 306

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -1

Query: 813 NVLRGTGGAFVLVLYDEIKKVL 748
           N +RGTG A VL +Y+E++K +
Sbjct: 285 NAIRGTGAALVLAIYNELQKYM 306


>Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical
           protein C47E12.2 protein.
          Length = 306

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 816 SNVLRGTGGAFVLVLYDEIKK 754
           +N+ R  GGA V+ LY+EI K
Sbjct: 284 ANIFRSAGGALVMALYEEIHK 304


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,177,404
Number of Sequences: 27780
Number of extensions: 348358
Number of successful extensions: 533
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)