Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_E22
         (761 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23645-7|AAK26132.2|  157|Caenorhabditis elegans Hypothetical pr...    44   2e-04
U21324-10|AAM22045.1|  102|Caenorhabditis elegans Hypothetical p...    34   0.096
AF022973-4|AAC25798.1|  314|Caenorhabditis elegans Temporarily a...    28   6.3  
Z82268-1|CAB05197.3|  508|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AF003147-1|AAB54205.2|  569|Caenorhabditis elegans Hypothetical ...    28   8.3  

>L23645-7|AAK26132.2|  157|Caenorhabditis elegans Hypothetical
           protein F54F2.7 protein.
          Length = 157

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 25/80 (31%), Positives = 36/80 (45%)
 Frame = -2

Query: 301 DRLNNSVXXXXXXXXXXXXXXSVICKIEFSDESVFEVPCCMKGTLVEVNEELVQNPLLLK 122
           DR  N V              S +C  +  D S   V   ++GTLVE+N+ L   P  ++
Sbjct: 61  DRSTNQVSGKGKKGALILQPDSKLCTFKCKDGSEHVVRAGVRGTLVEMNDRLKTTPDFIR 120

Query: 121 NMPDSDGFIAIMLASIAISE 62
             PD+ GFIAI+     + E
Sbjct: 121 TAPDNQGFIAIITYGAGVRE 140


>U21324-10|AAM22045.1|  102|Caenorhabditis elegans Hypothetical
           protein C35D10.17 protein.
          Length = 102

 Score = 34.3 bits (75), Expect = 0.096
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 750 CHLNHPFRKFIGYCNDYDRDMRKCLKAERLQRQKAN 643
           CH   P  K IG C+ +D  + +C K ER+ R+  N
Sbjct: 24  CHSEKPIGKMIGKCSYWDEAVWQCTKKERIWRRDNN 59


>AF022973-4|AAC25798.1|  314|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 57 protein.
          Length = 314

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 20/75 (26%), Positives = 37/75 (49%)
 Frame = -2

Query: 232 ICKIEFSDESVFEVPCCMKGTLVEVNEELVQNPLLLKNMPDSDGFIAIMLASIAISEATK 53
           I + E+ +E +     C   T + V+  +++NPL     P+SD F    L +I  S +T 
Sbjct: 218 ILQKEYENEGII----CQTITPLLVSTNMIKNPLSSIFCPNSDSFAKSSLNTIGNSSST- 272

Query: 52  SELLTHEEYIKCMMF 8
           +  +TH+   + + F
Sbjct: 273 TGYITHQIQFELIKF 287


>Z82268-1|CAB05197.3|  508|Caenorhabditis elegans Hypothetical
           protein F52B11.1a protein.
          Length = 508

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = -3

Query: 693 DMRKCLKAERLQRQKANLDESRQRHANIRARILAQSA 583
           DMRKC  A+RL  +K      RQ   N++A I+A++A
Sbjct: 42  DMRKCFSAKRLYNEKV----KRQTDENLKA-IMAKTA 73


>AF003147-1|AAB54205.2|  569|Caenorhabditis elegans Hypothetical
           protein C11D9.1 protein.
          Length = 569

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = -2

Query: 235 VICKIEFSDESVFEVPCCMKGTLVEVNEELVQNPLLLKNMPDS 107
           ++ K+E +  S  E  C  +  +++  + +VQ PLLLKN+ D+
Sbjct: 328 LLSKLE-AVNSTREQHCSWESRMIKPVQRIVQYPLLLKNIADA 369


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,698,841
Number of Sequences: 27780
Number of extensions: 305258
Number of successful extensions: 764
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)