Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_E22
         (761 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               26   0.33 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.1  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    21   9.4  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   9.4  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   9.4  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.4  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   9.4  

>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 756 VDCHLNHPFRKFIGYCNDYDRDMRKCLKAERLQR 655
           +D  L    RK I  C D  ++  KCL A++  R
Sbjct: 86  MDMDLKDSIRKIIRQCVDNAKNEDKCLTAQKFSR 119


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 108 ESGMFFSNNGFCTSSSLTSTK 170
           +S M F NN  CTS++ +  K
Sbjct: 623 DSNMGFLNNSMCTSTTTSPDK 643


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -2

Query: 490 DNLKTFTERYFSKRYLINVDGI 425
           +N   + ++ + K Y+IN++ I
Sbjct: 95  NNYNNYNKKLYYKNYIINIEQI 116


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 427 IKNNDMMIMFHS 392
           I+NND ++ FHS
Sbjct: 256 IRNNDRILYFHS 267


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -2

Query: 490 DNLKTFTERYFSKRYLINVDGI 425
           +N   + ++ + K Y+IN++ I
Sbjct: 336 NNYNNYNKKLYYKNYIINIEQI 357


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 681 CLKAERLQRQKANLDE 634
           CLK E  +R+K +LD+
Sbjct: 117 CLKFEEQKRRKKSLDD 132


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = +3

Query: 456 EKYLSVKVFK----LSKSGIESKML-KSIVFIITKLCFLI*IYISWLLRFGLKFVLEYWR 620
           ++  ++K+ K    +    +E  M+ K ++ + TK  FL+ ++  +     L FV+EY  
Sbjct: 9   DELYAIKILKKDIIIQDDDVECTMVEKRVLALSTKPPFLVQLHSCFQTMDRLYFVMEYVN 68

Query: 621 G 623
           G
Sbjct: 69  G 69


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,256
Number of Sequences: 438
Number of extensions: 3697
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)