Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_E21
         (739 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025723-5|AAK29936.2|  183|Caenorhabditis elegans Hypothetical ...   107   6e-24
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr...    36   0.023
Z81536-11|CAB04363.2|  295|Caenorhabditis elegans Hypothetical p...    33   0.16 
Z81536-5|CAB04366.1|  297|Caenorhabditis elegans Hypothetical pr...    31   0.85 
AF039053-5|AAC25875.2|  293|Caenorhabditis elegans Serpentine re...    30   2.0  
Z50794-8|CAA90655.2|  450|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z49937-9|CAO78727.1|  450|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ...    28   7.9  
AF078157-18|AAG24080.1|  338|Caenorhabditis elegans Seven tm rec...    28   7.9  

>AC025723-5|AAK29936.2|  183|Caenorhabditis elegans Hypothetical
           protein Y54F10AM.5 protein.
          Length = 183

 Score =  107 bits (258), Expect = 6e-24
 Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 1/152 (0%)
 Frame = -1

Query: 739 YLPEDSXLTV-QEVNLSGSTLYAGSFHLGKYCETINNEYMLCRQEENDPRKCINEGKAVT 563
           + P D  LTV QE+ LS   L + + ++ K+CE   NE+ML R+E  DPR  + EG A+T
Sbjct: 8   HFPSDEELTVPQEITLSTPWLKSIAPYMAKHCEKEANEFMLRRKEAEDPRAVLKEGAALT 67

Query: 562 ACTLEFFKKVKKTCLAEFNQYSNCLDKSSGDYAFRHCRKTQGVFDQCMLENLNLPRPGFG 383
           AC + F + +K++CL +  + + C+D+SS       C   Q   D C+  NLNL RP  G
Sbjct: 68  ACGVNFLQSLKRSCLPQTQKLAECVDQSSAKLYMSKCHDDQKELDACVEANLNLTRPKLG 127

Query: 382 YFCEARVHDTKRPKPLPEPKAVYPDATPALPE 287
           YF +  V+D+    P  + +    +A   L E
Sbjct: 128 YFSKLHVYDSATAAPEVKLRDYKAEAAKVLNE 159


>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
           protein H03E18.1 protein.
          Length = 1147

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 11/163 (6%)
 Frame = -1

Query: 718 LTVQEVNLS---GSTLYAGSFHLGKYC-ETINNEYMLCRQEENDPRKCINEGKAVTACTL 551
           LT+Q+ + S   G     G+   G  C  TI + Y+L    E      +N+ + + A T 
Sbjct: 216 LTLQQNDASVAKGGKTGDGNKGKGPVCYRTIRHRYLLGADFEEHDVDSVNDCRCLCAATY 275

Query: 550 EFFKKVKKTCLAEFNQYSNCLDKSS--GDYAFRHCRKTQGVFDQC----MLENLNLPRPG 389
               K  K    +F   +  L+K +  G Y     RKT   +  C    +LE  +   P 
Sbjct: 276 LPNNKKNKCMSFQFRNKTCTLNKGNHLGQYDLIEQRKTLYQYVGCDPEILLETASSKCPN 335

Query: 388 FG-YFCEARVHDTKRPKPLPEPKAVYPDATPALPEDAEKKPPR 263
           F     E +  DTK+  P  +PK     A     E  E K P+
Sbjct: 336 FKPKSAEKKKPDTKKETPTKKPKVELVTAKTVEGEKKETKKPK 378


>Z81536-11|CAB04363.2|  295|Caenorhabditis elegans Hypothetical
           protein F40D4.7 protein.
          Length = 295

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -1

Query: 628 YMLCRQEENDPRKCINEGKAVTACTLEFFKKVK 530
           Y++C  + N P  C+N G A+ +C  ++F+ +K
Sbjct: 146 YVICNYQLNVPYNCVNVGCAMNSCFRQYFRPLK 178


>Z81536-5|CAB04366.1|  297|Caenorhabditis elegans Hypothetical
           protein F40D4.6 protein.
          Length = 297

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -1

Query: 628 YMLCRQEENDPRKCINEGKAVTACTLEFFKKVK 530
           Y++C  + N P  C+N G A+ +C  ++F   K
Sbjct: 149 YVICNYKLNIPYNCVNIGCAINSCYRQYFLSSK 181


>AF039053-5|AAC25875.2|  293|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 23 protein.
          Length = 293

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 628 YMLCRQEENDPRKCINEGKAVTACTLEFFKKVK 530
           Y  C  E   PR C+  G ++ AC+  F+ K K
Sbjct: 146 YYFCNFELTFPRNCLTIGCSINACSSRFWTKSK 178


>Z50794-8|CAA90655.2|  450|Caenorhabditis elegans Hypothetical
           protein F59F5.1 protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = -1

Query: 697 LSGSTLYAGSFHLGKYCETINNEYMLCRQEENDPRKCINEGKAVTACTLEFFKKVKKTCL 518
           ++GS L  GSF +G +C+ I   Y+L          C     ++ +   E+FKK + T +
Sbjct: 108 IAGSFLTGGSFVVGPFCKNI---YLLMLATFGMGIGCGLMRNSIISIQCEYFKKKRNTVM 164

Query: 517 A 515
           A
Sbjct: 165 A 165


>Z49937-9|CAO78727.1|  450|Caenorhabditis elegans Hypothetical
           protein F59F5.1 protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = -1

Query: 697 LSGSTLYAGSFHLGKYCETINNEYMLCRQEENDPRKCINEGKAVTACTLEFFKKVKKTCL 518
           ++GS L  GSF +G +C+ I   Y+L          C     ++ +   E+FKK + T +
Sbjct: 108 IAGSFLTGGSFVVGPFCKNI---YLLMLATFGMGIGCGLMRNSIISIQCEYFKKKRNTVM 164

Query: 517 A 515
           A
Sbjct: 165 A 165


>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
           potassium channelsprotein 2 protein.
          Length = 1564

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = -1

Query: 436 VFDQCMLENLNLPRPGFGYFCEARVHDTKRPKPLPEPKAVYPDATP-ALPEDAEKKPP 266
           +F QC +       P         VH++K P P  +P+    D  P A+  + EK+PP
Sbjct: 812 LFSQCSVSGKKYEPPEI---IPEEVHESKLPSPSFDPQTSESDEEPMAVFVEEEKRPP 866


>AF078157-18|AAG24080.1|  338|Caenorhabditis elegans Seven tm
           receptor protein 28 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +2

Query: 569 RLTLVDTFSRIILFLTTQHIL-IVNGFTIFXQMKGTS 676
           R   V TFS  ++ L TQ+++ +V GF ++ +++G +
Sbjct: 195 RWNSVSTFSMFVVILLTQYVICLVCGFIMYRRIEGNA 231


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,912,276
Number of Sequences: 27780
Number of extensions: 290586
Number of successful extensions: 933
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)