Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_E20
(680 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 211 8e-56
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 167 1e-42
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 166 3e-42
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 159 3e-40
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 111 1e-25
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 110 2e-25
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 99 7e-22
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 70 4e-13
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 53 3e-08
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 26 5.8
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 211 bits (515), Expect = 8e-56
Identities = 96/166 (57%), Positives = 121/166 (72%), Gaps = 1/166 (0%)
Frame = -2
Query: 496 PVVFFDITVGTTEIGRMIFELFADVVPKTSENFREFCTGEYRR-DGVPLGYKGATFHRVI 320
PVVF DI + +GR+ LF+ +VPKT+ENFR+FCTGE + P+GYK +TFHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
Query: 319 KDFMIQGGDFVNGDGTGVMSIYGGSTFADENFGLKHDSPGLLSMANSGKDTNGCQXFITC 140
+ FMIQGGDFV+GDGTG +I+ TF DENF LKHD PGLLSMAN+GKD+NGCQ FIT
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITT 124
Query: 139 AKCNXLDNKHVVFGRVIDGXLXMRKXENVPTGPNNKPKRPVTISXC 2
C+ LD KHVVFG VI+G +++ E+ P G N++PK V I C
Sbjct: 125 VPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVEC 170
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 167 bits (406), Expect = 1e-42
Identities = 87/162 (53%), Positives = 105/162 (64%)
Frame = -2
Query: 487 FFDITVGTTEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGYKGATFHRVIKDFM 308
+F I++ + FELF +VVPKT +NF C G + +DG L YKG+ FHRVIK+FM
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNG-FEKDGRCLTYKGSRFHRVIKNFM 64
Query: 307 IQGGDFVNGDGTGVMSIYGGSTFADENFGLKHDSPGLLSMANSGKDTNGCQXFITCAKCN 128
+QGGDF G+GTG SIYG F DENF LKHD P LLSMAN+G +TNG Q FIT
Sbjct: 65 LQGGDFTRGNGTGGESIYG-EKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTP 123
Query: 127 XLDNKHVVFGRVIDGXLXMRKXENVPTGPNNKPKRPVTISXC 2
LD KHVVFG+VI G +R EN+ T N+ P PV I C
Sbjct: 124 HLDGKHVVFGKVIQGKSTVRTIENLET-KNDDPVVPVVIEEC 164
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 166 bits (403), Expect = 3e-42
Identities = 86/163 (52%), Positives = 105/163 (64%), Gaps = 1/163 (0%)
Frame = -2
Query: 487 FFDITVGTTEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGYKGATFHRVIKDFM 308
FFD+ +GR++F+LF DVVPKT+ NFR CTGE GY G+TFHRVI FM
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKG-----YGYAGSTFHRVIPQFM 59
Query: 307 IQGGDFVNGDGTGVMSIYGGSTFADENFGLKHDSPGLLSMANSGKDTNGCQXFITCAKCN 128
+QGGDF G+GTG SIYG F DENF LKH+ PGLLSMAN+G +TNG Q FIT
Sbjct: 60 LQGGDFTRGNGTGGKSIYG-EKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTP 118
Query: 127 XLDNKHVVFGRVIDGXLXMRKXENVPTGPNNKPKRP-VTISXC 2
LD KHVVFG V +G ++K E++ G N+ R + I C
Sbjct: 119 WLDGKHVVFGEVTEGMDVVKKVESL--GSNSGATRARIVIDKC 159
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 159 bits (386), Expect = 3e-40
Identities = 83/160 (51%), Positives = 97/160 (60%)
Frame = -2
Query: 490 VFFDITVGTTEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGYKGATFHRVIKDF 311
V+FD+ G +GR+ LF VPKT+ENFR TGE GY+G+ FHRVI +F
Sbjct: 29 VYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKG-----FGYEGSIFHRVIPNF 83
Query: 310 MIQGGDFVNGDGTGVMSIYGGSTFADENFGLKHDSPGLLSMANSGKDTNGCQXFITCAKC 131
MIQGGD GDGTG SIYG S F DENF L H PGLLSMAN+G D+NG Q FIT K
Sbjct: 84 MIQGGDITKGDGTGGKSIYG-SRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKT 142
Query: 130 NXLDNKHVVFGRVIDGXLXMRKXENVPTGPNNKPKRPVTI 11
LD HVVFG V+ G ++K T +KP V I
Sbjct: 143 PWLDGHHVVFGEVLSGYDIVKKISKAETDNRDKPLEDVKI 182
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 111 bits (266), Expect = 1e-25
Identities = 63/152 (41%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Frame = -2
Query: 463 TEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGYKGATFHRVIKDFMIQGGDFVN 284
T +G+++ EL+ + PKT +NF Y Y G FHRVI DF+IQGGD
Sbjct: 8 TSLGKILIELYTEHAPKTCQNFYTLAKEGY--------YDGVIFHRVIPDFVIQGGD-PT 58
Query: 283 GDGTGVMSIYGGSTFADE-NFGLKHDSPGLLSMANSGKDTNGCQXFITCAKCNXLDNKHV 107
G G G SIYG F DE + L H G+LSMAN+G +TN Q FIT A LD KH
Sbjct: 59 GTGRGGTSIYGDK-FDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHT 117
Query: 106 VFGRVIDGXLXMRKXENVPTGPNNKPKRPVTI 11
+FGRV+ G ++ + T +++P P+ I
Sbjct: 118 IFGRVVSGLSVCKRMGLIRTDSSDRPIEPLKI 149
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 110 bits (264), Expect = 2e-25
Identities = 65/152 (42%), Positives = 79/152 (51%), Gaps = 1/152 (0%)
Frame = -2
Query: 463 TEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGYKGATFHRVIKDFMIQGGDFVN 284
T G + EL D P NF + Y Y+ FHR I FMIQGGD +
Sbjct: 282 TNHGEINIELHTDYAPHAVYNFVQLAKQGY--------YRNTIFHRNIARFMIQGGD-PS 332
Query: 283 GDGTGVMSIYGGSTFADENFG-LKHDSPGLLSMANSGKDTNGCQXFITCAKCNXLDNKHV 107
G G G SI+G F DE LKHD G++SMAN GK+TNG Q FI LDNKH
Sbjct: 333 GTGRGGQSIWG-KPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHT 391
Query: 106 VFGRVIDGXLXMRKXENVPTGPNNKPKRPVTI 11
+FGRV+ G + E VPT N+ PK P+ +
Sbjct: 392 IFGRVVGGLNVLDALEKVPTNSNDHPKLPIKL 423
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 98.7 bits (235), Expect = 7e-22
Identities = 63/168 (37%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
Frame = -2
Query: 511 RNPNNPVVFFDITVGTTEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGYKGATF 332
R N ++ + T G + +L+ + PK +NF Y Y F
Sbjct: 445 RQENGNILLGKAAIIHTTQGDISIKLYPEEAPKAVQNFTTHAENGY--------YDNTIF 496
Query: 331 HRVIKDFMIQGGDFVNGDGTGVMSIYGGSTFADE-NFGLKHDSPGLLSMANSGKDTNGCQ 155
HR+IK+FMIQGGD + GDGTG SI+ F DE + LKHD P +SMANSG +TNG Q
Sbjct: 497 HRIIKNFMIQGGDPL-GDGTGGESIWK-KDFEDEISPNLKHDRPFTVSMANSGPNTNGSQ 554
Query: 154 XFITCAKCNXLDNKHVVFGRVIDGXLXMRKXENVPTGPNNKPKRPVTI 11
FIT LD KH +F R G + + E T ++P P I
Sbjct: 555 FFITTDLTPWLDGKHTIFARAYAGLDVVHRIEQGETDKYDRPLEPTKI 602
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 69.7 bits (163), Expect = 4e-13
Identities = 51/163 (31%), Positives = 73/163 (44%), Gaps = 1/163 (0%)
Frame = -2
Query: 496 PVVFFDITVGTTEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGYKGATFHRVIK 317
P+ + + TT G + EL+ VPK NF + C Y Y G HRV+
Sbjct: 9 PLATGTVILKTTR-GDIQIELWCKEVPKACRNFIQLCLEGY--------YDGTIVHRVVP 59
Query: 316 DFMIQGGDFVNGDGTGVMSIYGGSTFADENFGLKHDSPGLLSMANSGKDTNGCQXFITCA 137
+F+IQGGD G G G SIYG + + L+ GL+ MA + + N Q FIT
Sbjct: 60 EFLIQGGD-PTGTGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLG 118
Query: 136 KCNXLDNKHVVFGRVI-DGXLXMRKXENVPTGPNNKPKRPVTI 11
+ K +FGRV+ D + + + N +P P I
Sbjct: 119 PTPEWNGKQTLFGRVVGDTIYNVVRISELELDANQRPVFPPKI 161
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 53.2 bits (122), Expect = 3e-08
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Frame = -2
Query: 463 TEIGRMIFELFADVVPKTSENFREFCTGEYRRDGVPLGYKGATFHRVIKDFMIQGGDFVN 284
T +G ++ +LF PKT ENF + C +Y Y F+ + ++ Q GD +
Sbjct: 7 TTVGDLVIDLFVKEAPKTCENFLKLCKLKY--------YNFCPFYNIQHNYTCQTGDPLG 58
Query: 283 GDGTGVMSIYG----GSTF--ADENFGLKHDSPGLLSMAN---SGKDTN----GCQXFIT 143
G G ++ G+ F A+ N L H+ GL+SM+ S +D G Q IT
Sbjct: 59 PTGDGGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIIT 118
Query: 142 CA-KCNXLDNKHVVFGRVIDGXLXMRKXENVPTGPNNKPKRPVTI 11
+ LD ++ ++G+V +G + K + +P R + I
Sbjct: 119 LSDNLEGLDERYPIYGQVAEGFDTLLKINDAICDEEGQPYRDIRI 163
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 25.8 bits (54), Expect = 5.8
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +3
Query: 390 NSLKFSLV-FGTTSANNSNIIRPISVVPTVMS-KNTT 494
NS K S++ G +N+SNII+P + T++S +N T
Sbjct: 479 NSYKNSVLSIGNNHSNHSNIIKPNTYKNTILSNENNT 515
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,661,291
Number of Sequences: 5004
Number of extensions: 55095
Number of successful extensions: 151
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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