Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_E16
(724 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 59 3e-09
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 59 3e-09
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 59 3e-09
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 51 7e-07
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 51 7e-07
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 50 1e-06
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 50 1e-06
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 50 1e-06
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 44 1e-04
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 44 1e-04
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 37 0.017
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 37 0.017
V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy ch... 33 0.16
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 30 1.5
Z99171-2|CAB16314.1| 710|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 28 7.8
Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical p... 28 7.8
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -2
Query: 723 ERRIKELTXQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 610
+RR++EL Q +ED+KN ER+QDL+DKLQQK+KT K+Q
Sbjct: 1853 DRRVRELQFQVDEDKKNFERLQDLIDKLQQKLKTQKKQ 1890
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -2
Query: 723 ERRIKELTXQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 610
+RR++EL Q +ED+KN ER+QDL+DKLQQK+KT K+Q
Sbjct: 1853 DRRVRELQFQVDEDKKNFERLQDLIDKLQQKLKTQKKQ 1890
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -2
Query: 723 ERRIKELTXQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 610
+RR++EL Q +ED+KN ER+QDL+DKLQQK+KT K+Q
Sbjct: 1856 DRRVRELQFQVDEDKKNFERLQDLIDKLQQKLKTQKKQ 1893
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 57.6 bits (133), Expect = 8e-09
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = -2
Query: 723 ERRIKELTXQAEEDRKNHERMQDLVDKLQQKIKTYKRQXXXXXXXXXXXXAKFRK 559
+R+ +EL Q +ED+K+ ERM DL++KLQQKIKTYKRQ AK+R+
Sbjct: 1854 DRKCRELQFQVDEDKKSQERMYDLIEKLQQKIKTYKRQIEDAESLASGNLAKYRQ 1908
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = -2
Query: 723 ERRIKELTXQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 610
ERR+KE+ Q E++KN ER+ +LVDKLQ K+K +KRQ
Sbjct: 1857 ERRVKEVEFQVVEEKKNEERLTELVDKLQCKLKIFKRQ 1894
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = -2
Query: 723 ERRIKELTXQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 610
ERR+KE+ Q E++KN ER+ +LVDKLQ K+K +KRQ
Sbjct: 1857 ERRVKEVEFQVVEEKKNEERLTELVDKLQCKLKIFKRQ 1894
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/55 (45%), Positives = 34/55 (61%)
Frame = -2
Query: 723 ERRIKELTXQAEEDRKNHERMQDLVDKLQQKIKTYKRQXXXXXXXXXXXXAKFRK 559
ERR +EL Q EED+K +R+Q+ V+KLQQKI+ KRQ +KFR+
Sbjct: 1851 ERRARELQFQVEEDKKAFDRLQENVEKLQQKIRVQKRQIEEAEEVATQNLSKFRQ 1905
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/55 (45%), Positives = 34/55 (61%)
Frame = -2
Query: 723 ERRIKELTXQAEEDRKNHERMQDLVDKLQQKIKTYKRQXXXXXXXXXXXXAKFRK 559
ERR +EL Q EED+K +R+Q+ V+KLQQKI+ KRQ +KFR+
Sbjct: 1851 ERRARELQFQVEEDKKAFDRLQENVEKLQQKIRVQKRQIEEAEEVATQNLSKFRQ 1905
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/55 (45%), Positives = 34/55 (61%)
Frame = -2
Query: 723 ERRIKELTXQAEEDRKNHERMQDLVDKLQQKIKTYKRQXXXXXXXXXXXXAKFRK 559
ERR +EL Q EED+K +R+Q+ V+KLQQKI+ KRQ +KFR+
Sbjct: 1851 ERRARELQFQVEEDKKAFDRLQENVEKLQQKIRVQKRQIEEAEEVATQNLSKFRQ 1905
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 44.0 bits (99), Expect = 1e-04
Identities = 16/38 (42%), Positives = 29/38 (76%)
Frame = -2
Query: 723 ERRIKELTXQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 610
+R+++E Q ED+KN++++Q+LV+KL K+K K+Q
Sbjct: 1860 DRKVREFEFQVAEDKKNYDKLQELVEKLTAKLKLQKKQ 1897
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 44.0 bits (99), Expect = 1e-04
Identities = 16/38 (42%), Positives = 29/38 (76%)
Frame = -2
Query: 723 ERRIKELTXQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 610
+R+++E Q ED+KN++++Q+LV+KL K+K K+Q
Sbjct: 1860 DRKVREFEFQVAEDKKNYDKLQELVEKLTAKLKLQKKQ 1897
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 44.0 bits (99), Expect = 1e-04
Identities = 16/38 (42%), Positives = 29/38 (76%)
Frame = -2
Query: 723 ERRIKELTXQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 610
+R+++E Q ED+KN++++Q+LV+KL K+K K+Q
Sbjct: 1860 DRKVREFEFQVAEDKKNYDKLQELVEKLTAKLKLQKKQ 1897
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -2
Query: 723 ERRIKELTXQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 610
+RRIKE+ +E+ KN QD D+L +K+ KRQ
Sbjct: 772 DRRIKEVQQLVDEEHKNFVMAQDTADRLTEKLNIQKRQ 809
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -2
Query: 723 ERRIKELTXQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 610
+RRIKE+ +E+ KN QD D+L +K+ KRQ
Sbjct: 772 DRRIKEVQQLVDEEHKNFVMAQDTADRLTEKLNIQKRQ 809
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -2
Query: 723 ERRIKELTXQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 610
+RRIKE+ +E+ KN QD D+L +K+ KRQ
Sbjct: 788 DRRIKEVQQLVDEEHKNFVMAQDTADRLTEKLNIQKRQ 825
>V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy chain
protein.
Length = 91
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = -2
Query: 663 MQDLVDKLQQKIKTYKRQ 610
+QDL+DKLQQK+KT K+Q
Sbjct: 1 LQDLIDKLQQKLKTQKKQ 18
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/38 (28%), Positives = 26/38 (68%)
Frame = -2
Query: 723 ERRIKELTXQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 610
E+R+ + T Q E++++ +E+ ++L++K K + +RQ
Sbjct: 1842 EKRLNDTTQQFEDEKRANEQAKELLEKSNLKNRNLRRQ 1879
>Z99171-2|CAB16314.1| 710|Caenorhabditis elegans Hypothetical
protein F47G4.2 protein.
Length = 710
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 267 KILNMQFFFFCKPNKNIYTLGI 202
K+LN FF FCK N+Y+L I
Sbjct: 148 KLLNPDFFQFCKSFPNLYSLDI 169
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -3
Query: 125 ESASECV-GCTCAREHRRDTPPTSAPHTRTC 36
++ ++C+ GCTC ++RD+ H+R C
Sbjct: 484 KAPAKCLPGCTCRPAYKRDSDSGQCVHSRQC 514
>Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical
protein Y69H2.10a protein.
Length = 572
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -3
Query: 125 ESASECV-GCTCAREHRRDTPPTSAPHTRTC 36
++ ++C+ GCTC ++RD+ H+R C
Sbjct: 484 KAPAKCLPGCTCRPAYKRDSDSGQCVHSRQC 514
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,073,750
Number of Sequences: 27780
Number of extensions: 256995
Number of successful extensions: 960
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -