BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_E09
(550 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051888-1|AAK93312.1| 503|Drosophila melanogaster LD37690p pro... 32 0.44
AE014297-4320|AAF56856.1| 503|Drosophila melanogaster CG11877-P... 32 0.44
AY069179-1|AAL39324.1| 546|Drosophila melanogaster GH22722p pro... 31 0.78
AE014296-1236|AAF50577.2| 546|Drosophila melanogaster CG8596-PA... 31 0.78
AE014134-2255|AAS64697.1| 1548|Drosophila melanogaster CG6214-PL... 28 9.6
AE014134-2247|AAS64690.1| 1548|Drosophila melanogaster CG6214-PG... 28 9.6
>AY051888-1|AAK93312.1| 503|Drosophila melanogaster LD37690p
protein.
Length = 503
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 308 CPGCLTCLALSLRAKNC*RLSEICSGR*ERPHLLTRTRQ 424
CP C +C A +NC R I + ERP LT +Q
Sbjct: 70 CPLCHSCSASRFHCRNCVRNGNITHSQAERPESLTEKQQ 108
>AE014297-4320|AAF56856.1| 503|Drosophila melanogaster CG11877-PA
protein.
Length = 503
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 308 CPGCLTCLALSLRAKNC*RLSEICSGR*ERPHLLTRTRQ 424
CP C +C A +NC R I + ERP LT +Q
Sbjct: 70 CPLCHSCSASRFHCRNCVRNGNITHSQAERPESLTEKQQ 108
>AY069179-1|AAL39324.1| 546|Drosophila melanogaster GH22722p
protein.
Length = 546
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 229 IFFPALSTIVEMAAPFMLGPRPTFEAMSWMFDMPCI-KLAGEKLLAFIGNMFGSLGT 396
I +P T+++ +LGPRP M WM C+ ++ G F+G+++ LGT
Sbjct: 408 IGYPIGVTLIQTIFSKVLGPRPQGVWMGWMTGSGCLSRVLGP---VFVGSIYTRLGT 461
>AE014296-1236|AAF50577.2| 546|Drosophila melanogaster CG8596-PA
protein.
Length = 546
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 229 IFFPALSTIVEMAAPFMLGPRPTFEAMSWMFDMPCI-KLAGEKLLAFIGNMFGSLGT 396
I +P T+++ +LGPRP M WM C+ ++ G F+G+++ LGT
Sbjct: 408 IGYPIGVTLIQTIFSKVLGPRPQGVWMGWMTGSGCLSRVLGP---VFVGSIYTRLGT 461
>AE014134-2255|AAS64697.1| 1548|Drosophila melanogaster CG6214-PL,
isoform L protein.
Length = 1548
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 444 CNLRHCISLF-AYVQK*SRVFRANYFRVLHRPAEF 545
CN ISLF A + SRVF + ++H P+EF
Sbjct: 1045 CNYGAAISLFTATLHASSRVFHRLFNNIMHCPSEF 1079
>AE014134-2247|AAS64690.1| 1548|Drosophila melanogaster CG6214-PG,
isoform G protein.
Length = 1548
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 444 CNLRHCISLF-AYVQK*SRVFRANYFRVLHRPAEF 545
CN ISLF A + SRVF + ++H P+EF
Sbjct: 1045 CNYGAAISLFTATLHASSRVFHRLFNNIMHCPSEF 1079
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,845,500
Number of Sequences: 53049
Number of extensions: 439503
Number of successful extensions: 963
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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