Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_E07
         (790 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   448   e-126
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   448   e-126
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   448   e-126
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   448   e-126
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   448   e-126

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  448 bits (1103), Expect = e-126
 Identities = 205/248 (82%), Positives = 223/248 (89%)
 Frame = -3

Query: 788 MIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFA 609
           M+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVKWAREHLEKPI V +VF 
Sbjct: 164 MLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFG 223

Query: 608 QDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQK 429
           QDEMIDC+           TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQK
Sbjct: 224 QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQK 283

Query: 428 GYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVM 249
           GYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM
Sbjct: 284 GYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVM 343

Query: 248 IKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTL 69
           IKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG L
Sbjct: 344 IKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPL 403

Query: 68  KKDRIREE 45
           KKDR++EE
Sbjct: 404 KKDRLKEE 411


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  448 bits (1103), Expect = e-126
 Identities = 205/248 (82%), Positives = 223/248 (89%)
 Frame = -3

Query: 788 MIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFA 609
           M+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVKWAREHLEKPI V +VF 
Sbjct: 153 MLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFG 212

Query: 608 QDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQK 429
           QDEMIDC+           TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQK
Sbjct: 213 QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQK 272

Query: 428 GYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVM 249
           GYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM
Sbjct: 273 GYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVM 332

Query: 248 IKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTL 69
           IKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG L
Sbjct: 333 IKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPL 392

Query: 68  KKDRIREE 45
           KKDR++EE
Sbjct: 393 KKDRLKEE 400


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  448 bits (1103), Expect = e-126
 Identities = 205/248 (82%), Positives = 223/248 (89%)
 Frame = -3

Query: 788 MIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFA 609
           M+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVKWAREHLEKPI V +VF 
Sbjct: 140 MLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFG 199

Query: 608 QDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQK 429
           QDEMIDC+           TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQK
Sbjct: 200 QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQK 259

Query: 428 GYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVM 249
           GYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM
Sbjct: 260 GYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVM 319

Query: 248 IKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTL 69
           IKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG L
Sbjct: 320 IKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPL 379

Query: 68  KKDRIREE 45
           KKDR++EE
Sbjct: 380 KKDRLKEE 387


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  448 bits (1103), Expect = e-126
 Identities = 205/248 (82%), Positives = 223/248 (89%)
 Frame = -3

Query: 788 MIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFA 609
           M+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVKWAREHLEKPI V +VF 
Sbjct: 140 MLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFG 199

Query: 608 QDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQK 429
           QDEMIDC+           TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQK
Sbjct: 200 QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQK 259

Query: 428 GYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVM 249
           GYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM
Sbjct: 260 GYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVM 319

Query: 248 IKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTL 69
           IKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG L
Sbjct: 320 IKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPL 379

Query: 68  KKDRIREE 45
           KKDR++EE
Sbjct: 380 KKDRLKEE 387


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  448 bits (1103), Expect = e-126
 Identities = 205/248 (82%), Positives = 223/248 (89%)
 Frame = -3

Query: 788 MIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFA 609
           M+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVKWAREHLEKPI V +VF 
Sbjct: 153 MLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFG 212

Query: 608 QDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQK 429
           QDEMIDC+           TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TVARAGQK
Sbjct: 213 QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQK 272

Query: 428 GYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVM 249
           GYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM
Sbjct: 273 GYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVM 332

Query: 248 IKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTL 69
           IKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG L
Sbjct: 333 IKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPL 392

Query: 68  KKDRIREE 45
           KKDR++EE
Sbjct: 393 KKDRLKEE 400


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,854,464
Number of Sequences: 53049
Number of extensions: 805432
Number of successful extensions: 2265
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2265
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)