Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_E05
         (657 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53148-1|AAB37071.1|  175|Caenorhabditis elegans Hypothetical pr...    46   3e-05
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ...    29   2.9  
AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.      29   2.9  
AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.      29   2.9  
AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1 suppres...    29   2.9  
Z81568-3|CAB04592.1|  643|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>U53148-1|AAB37071.1|  175|Caenorhabditis elegans Hypothetical
           protein C26F1.7 protein.
          Length = 175

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 38/115 (33%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
 Frame = -1

Query: 456 DKYPXAKVHYLVLPHEEINSIYKLNKSHISLLEEFGNIFKELKEEN----------ESEL 307
           D  P AK HYLVL  + I     L  + + LLEE     +EL  E+          E  L
Sbjct: 36  DIKPKAKNHYLVLSKQHIAKPTDLTVADVPLLEEMEKTGRELLREHLKKKGEADTVEDML 95

Query: 306 RAGFHAIP--SMQRMHMHVISTDMISTSLKTKIHWXSFCTKFFIPYDELLQELKD 148
           R GFH  P  S+  +HMH+I        +  K+ +     K F P  EL+ +LK+
Sbjct: 96  RIGFHLPPLLSVHHLHMHIIYPISDMGLISRKLTFRP--GKVFKPARELIDQLKE 148


>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
            protein Y81G3A.3 protein.
          Length = 1696

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 21/82 (25%), Positives = 33/82 (40%)
 Frame = -1

Query: 393  YKLNKSHISLLEEFGNIFKELKEENESELRAGFHAIPSMQRMHMHVISTDMISTSLKTKI 214
            + L   H  L+E      K L ++  +EL    H I    R H H    DM++  +  K 
Sbjct: 1195 FTLKIGHAQLIEAQIRHLK-LSDDVRAELLDALHLISVSDRPHSHKEKMDMLTPKIGAKA 1253

Query: 213  HWXSFCTKFFIPYDELLQELKD 148
               +  TK  IP ++     K+
Sbjct: 1254 --ANIITKLLIPVEDNFGAFKE 1273


>AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 105 LMKTPLQCNQCSFKPKNMPEXKEH*LKH 22
           L + P +C+QC +      + KEH +KH
Sbjct: 647 LEEKPFKCDQCEYASSRRDKLKEHIIKH 674


>AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 105 LMKTPLQCNQCSFKPKNMPEXKEH*LKH 22
           L + P +C+QC +      + KEH +KH
Sbjct: 647 LEEKPFKCDQCEYASSRRDKLKEHIIKH 674


>AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1
           suppressor/dio uptake defective/raf enhancer protein 1
           protein.
          Length = 909

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 105 LMKTPLQCNQCSFKPKNMPEXKEH*LKH 22
           L + P +C+QC +      + KEH +KH
Sbjct: 647 LEEKPFKCDQCEYASSRRDKLKEHIIKH 674


>Z81568-3|CAB04592.1|  643|Caenorhabditis elegans Hypothetical
           protein K08E3.4 protein.
          Length = 643

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
 Frame = -1

Query: 411 EEINSIYKLNKSHISL----LEEFGNIFKE---LKEENESELRAGFHAIPSMQRMHM 262
           E++NS+YK  K H+ L     EEF +   E   L++E E   R   H      R  M
Sbjct: 222 EKVNSVYKPTKPHVELKTVKREEFWSKMNEEEKLRQEEEKTAREQAHKQFEADRQRM 278


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,466,678
Number of Sequences: 27780
Number of extensions: 231639
Number of successful extensions: 634
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)