Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_D24
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   130   6e-31
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    60   1e-09
AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical...    32   0.31 
L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  130 bits (315), Expect = 6e-31
 Identities = 59/92 (64%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
 Frame = -3

Query: 331 PGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSD 152
           P L++YMSSGPVV MVW+GL+VVK GR MLGATNP  S PGTIRGD CIQ GRNI HGSD
Sbjct: 62  PSLIEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSD 121

Query: 151 SVESAKKEIGLWFTDKEVVGW-TPANENWVYE 59
           +V+SA +EI  WF  +E+  + +P   +WVYE
Sbjct: 122 AVDSANREIAHWFKQEEINDYASPFINSWVYE 153



 Score = 77.0 bits (181), Expect = 1e-14
 Identities = 35/58 (60%), Positives = 43/58 (74%)
 Frame = -2

Query: 503 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFXP 330
           ERTFI +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+ HY DL  +PF P
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFP 62


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 34/75 (45%), Positives = 44/75 (58%)
 Frame = -3

Query: 331 PGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSD 152
           P L+ YMSSGPVV M+WEG +VVK  R +LG       +  +I  DL ++      H SD
Sbjct: 37  PLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGCHCSD 95

Query: 151 SVESAKKEIGLWFTD 107
           SV SA +E  LWF +
Sbjct: 96  SVASANREYVLWFEE 110


>AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.15 protein.
          Length = 139

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 24/70 (34%), Positives = 35/70 (50%)
 Frame = -3

Query: 325 LVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSV 146
           LV+++SSGPV+ M   G      G   L        QP  IR    +   RN+ H SD  
Sbjct: 70  LVRHISSGPVIAMRVSGNARKCIGSSRLWPRLEPTVQP--IRQRFALSDVRNVAHASDE- 126

Query: 145 ESAKKEIGLW 116
           ++A+KE+ L+
Sbjct: 127 DAAEKELQLF 136


>L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical
           protein K02D10.4 protein.
          Length = 227

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 456 CGHHY*TFRKERLQTSRFEIRMAIRRTSP 370
           CGH        R +T +FE R+ ++R+SP
Sbjct: 107 CGHPVEVDDHHRRETKKFENRLTLKRSSP 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,433,151
Number of Sequences: 27780
Number of extensions: 294453
Number of successful extensions: 786
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)