Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_D21
(897 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68106-8|CAA92125.2| 558|Caenorhabditis elegans Hypothetical pr... 66 4e-11
Z49153-3|CAD30426.1| 558|Caenorhabditis elegans Hypothetical pr... 66 4e-11
Z83111-4|CAB05535.2| 498|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 28 7.9
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 28 7.9
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 28 7.9
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 28 7.9
>Z68106-8|CAA92125.2| 558|Caenorhabditis elegans Hypothetical
protein F41E7.2 protein.
Length = 558
Score = 65.7 bits (153), Expect = 4e-11
Identities = 53/239 (22%), Positives = 103/239 (43%), Gaps = 1/239 (0%)
Frame = -1
Query: 834 IFGVXNSXIXYEASLTYKIIKGLLAIFVGICLGIAWGVLCDVIPDHNDLYAPTVRSLLIF 655
IF V +S + ++K + AI + +G G L P +++ + R L+I
Sbjct: 236 IFSVTSSVTFTHDAFFLTMVKSIGAIVLAAIIGCVIGWLLRWFPKNDNRHTHFARFLVIA 295
Query: 654 GGGILVTYAGGYLGWGGTSGVAIMVCAGVAATRWSRRGWPINDNPVSEVYKLLWR-IFEP 478
V + LG+ V+ + V+ T W R P + + LW + P
Sbjct: 296 SPAYAVITSMLILGYAFPGIVSALCICCVSTTHW-REDNPKGIKVLVHQFDNLWYFVAVP 354
Query: 477 MLFTLSGYFLDVSQLNTKEFCLIIGCIISALFLRMLTAFLVGLANNLSIKESVFVSVTWI 298
+LF+L GY D ++ + + I R+++A ++ + +I E + +++T +
Sbjct: 355 LLFSLVGYTFDFQNMSAENWKTAFIIIAVGSSFRLISAMILSYYGHFNIYEQIILALTLM 414
Query: 297 PKAIVEAVLVRVAADSILSDASEEDKRTAAQHANIIVIAILITSTAGSVLTTALGPILL 121
PKA V+ L + +++ E + NI + A+++TS +L L P +L
Sbjct: 415 PKATVQCAL--APSLIFMTNGFPELREQTKLIINICITAVMVTSPIVEILLDVLAPRIL 471
>Z49153-3|CAD30426.1| 558|Caenorhabditis elegans Hypothetical
protein F41E7.2 protein.
Length = 558
Score = 65.7 bits (153), Expect = 4e-11
Identities = 53/239 (22%), Positives = 103/239 (43%), Gaps = 1/239 (0%)
Frame = -1
Query: 834 IFGVXNSXIXYEASLTYKIIKGLLAIFVGICLGIAWGVLCDVIPDHNDLYAPTVRSLLIF 655
IF V +S + ++K + AI + +G G L P +++ + R L+I
Sbjct: 236 IFSVTSSVTFTHDAFFLTMVKSIGAIVLAAIIGCVIGWLLRWFPKNDNRHTHFARFLVIA 295
Query: 654 GGGILVTYAGGYLGWGGTSGVAIMVCAGVAATRWSRRGWPINDNPVSEVYKLLWR-IFEP 478
V + LG+ V+ + V+ T W R P + + LW + P
Sbjct: 296 SPAYAVITSMLILGYAFPGIVSALCICCVSTTHW-REDNPKGIKVLVHQFDNLWYFVAVP 354
Query: 477 MLFTLSGYFLDVSQLNTKEFCLIIGCIISALFLRMLTAFLVGLANNLSIKESVFVSVTWI 298
+LF+L GY D ++ + + I R+++A ++ + +I E + +++T +
Sbjct: 355 LLFSLVGYTFDFQNMSAENWKTAFIIIAVGSSFRLISAMILSYYGHFNIYEQIILALTLM 414
Query: 297 PKAIVEAVLVRVAADSILSDASEEDKRTAAQHANIIVIAILITSTAGSVLTTALGPILL 121
PKA V+ L + +++ E + NI + A+++TS +L L P +L
Sbjct: 415 PKATVQCAL--APSLIFMTNGFPELREQTKLIINICITAVMVTSPIVEILLDVLAPRIL 471
>Z83111-4|CAB05535.2| 498|Caenorhabditis elegans Hypothetical
protein F57G8.5 protein.
Length = 498
Score = 64.5 bits (150), Expect = 1e-10
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 3/244 (1%)
Frame = -1
Query: 855 DTAFTEGIFGVXNSXIXYEASLTYKIIKGLLAIFVGICLGIAWGVLCDVIPDHNDLYAPT 676
D F +F V +S I +A + I+ +I +G GI G+L P + +
Sbjct: 216 DNLFCVIVFMVLSSIIFTDAPIATTILMNAGSILLGCIGGIIIGLLLWRFPRPDTTHTQF 275
Query: 675 VRSLLIFGGGILVTYAGGYLGWGGTSG-VAIMVCAGVAATRWSRRGWPINDNPVSEVYKL 499
R L+ G + G YL +G +A ++ + + A +W D VS YK
Sbjct: 276 ARITLL-GTSCIGLMIGTYLVKYSCAGFLAALITSSMCAMKWKTDNKDKLDCVVS-TYKY 333
Query: 498 LWRIFE-PMLFTLSGYFLDVSQLNTKEFCLIIGCIISALFLRMLTAFLVGLANNLSIKES 322
+W F P+LF G D S L+ K L I I L +R L L ++ ++KE
Sbjct: 334 VWDSFALPLLFICLGLKFDFSTLSWKIVLLCISVICIGLIVRALLVMLTTHFSHFNVKEK 393
Query: 321 VFVSVTWIPKAIVEAVLVRVAADSILSDASEEDKRTAAQHA-NIIVIAILITSTAGSVLT 145
++++ +P+A +A L A ++ DK A+ ++++LIT+ +L
Sbjct: 394 AVIALSLLPRATFQADL---APTLVVMATPFPDKLPDAELVMKAAILSVLITAPIFDILL 450
Query: 144 TALG 133
+G
Sbjct: 451 NLIG 454
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 31.5 bits (68), Expect = 0.85
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 660 IFGGGILVTYA-GGYLGWGGTSGVAIMVCAGVAATRWSRRGWPINDNPVSE 511
+F G LV Y G YL TSG+ I V G R R PI DN +E
Sbjct: 321 MFPKGTLVMYTDGSYLKRPPTSGIGIFVGPGHELNRSQRIRGPIQDNNYAE 371
>Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical
protein C49A1.5 protein.
Length = 498
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -3
Query: 199 EYNRYCYINNVDSWLRANHCSGPHPPIARLENIAWR 92
EY R YI +D WLR P I EN+ WR
Sbjct: 198 EYERQGYIT-LDYWLRMKFSDPKTPYIEPNENVEWR 232
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 566 ATPAHTIMATPDVPPH-PKYPPA*VTSIPPPKMS 664
++P + TP PP P PPA +IPPP S
Sbjct: 1491 SSPVPSTQTTPSRPPQMPPPPPASGKTIPPPPSS 1524
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 566 ATPAHTIMATPDVPPH-PKYPPA*VTSIPPPKMS 664
++P + TP PP P PPA +IPPP S
Sbjct: 1491 SSPVPSTQTTPSRPPQMPPPPPASGKTIPPPPSS 1524
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = -3
Query: 778 YQGFARDIRGDLPRYRMGRVVRCHSGSQ*FICTHSTEPAHFRRRNTCNLRWRVFRMGRYI 599
++G R+ + +Y++ +R H+G + F+C + F R + R+ +
Sbjct: 110 WKGCDREFKMFKAKYKLVNHMRVHTGERPFLCDVCNKV--FARSENLKIHKRIHSGEKPF 167
Query: 598 GCRHNG 581
C HNG
Sbjct: 168 QCTHNG 173
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = -3
Query: 778 YQGFARDIRGDLPRYRMGRVVRCHSGSQ*FICTHSTEPAHFRRRNTCNLRWRVFRMGRYI 599
++G R+ + +Y++ +R H+G + F+C + F R + R+ +
Sbjct: 123 WKGCDREFKMFKAKYKLVNHMRVHTGERPFLCDVCNKV--FARSENLKIHKRIHSGEKPF 180
Query: 598 GCRHNG 581
C HNG
Sbjct: 181 QCTHNG 186
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = -3
Query: 778 YQGFARDIRGDLPRYRMGRVVRCHSGSQ*FICTHSTEPAHFRRRNTCNLRWRVFRMGRYI 599
++G R+ + +Y++ +R H+G + F+C + F R + R+ +
Sbjct: 111 WKGCDREFKMFKAKYKLVNHMRVHTGERPFLCDVCNKV--FARSENLKIHKRIHSGEKPF 168
Query: 598 GCRHNG 581
C HNG
Sbjct: 169 QCTHNG 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,748,082
Number of Sequences: 27780
Number of extensions: 501736
Number of successful extensions: 1712
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1701
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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