Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_D21
         (897 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   2.9  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   3.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   3.8  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   6.6  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   6.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   8.7  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   8.7  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 374 IRRNSAEIMQPMIRQNSFVFSCETSRKYPL 463
           I RNSA  +   I++  F+F+C  S   P+
Sbjct: 285 IDRNSAYKIDQRIQKGLFLFACTNSCMNPI 314


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -1

Query: 96  GDFYRAQTLSPASSFHDSSQI 34
           GD Y  +++S  SSF+D +++
Sbjct: 65  GDIYTEESVSALSSFYDRTKM 85


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -1

Query: 96  GDFYRAQTLSPASSFHDSSQI 34
           GD Y  +++S  SSF+D +++
Sbjct: 80  GDIYTEESVSALSSFYDRTKM 100


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 743 QIPTNIASKPLIILYVKDA 799
           Q+P N  + P I+LY +D+
Sbjct: 304 QLPHNSTNPPNILLYYRDS 322


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = +1

Query: 529 INRPSSSGPPGGCNASAHHYGDTRCTAPS*IPSSVGYKYSSS 654
           +N       P    +S  H G +  T+P+   +S  Y Y S+
Sbjct: 53  VNYAQQHNSPSPTGSSPQHSGSSASTSPAARTTSSMYPYVSA 94


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 580  HHYGDTRCTAPS*IPSSVGYKYSSSENEQAPY 675
            H   + RC  P  + S+ G  +   E+E  PY
Sbjct: 1694 HCAPNRRCPPPPRMGSAEGLSHRGMEDEICPY 1725


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 440 ETSRKYPLSVNSMGS 484
           +T +KY +S NS+GS
Sbjct: 205 KTCKKYAISSNSLGS 219


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 270,843
Number of Sequences: 438
Number of extensions: 6772
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)