Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_D19
(583 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for ... 111 1e-24
BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a ... 111 1e-24
BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein. 111 1e-24
BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a ... 111 1e-24
BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a ... 111 1e-24
AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting ... 111 1e-24
AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a ... 96 9e-20
X94619-1|CAA64325.1| 21|Homo sapiens ribosomal protein L35a pr... 38 0.020
X65964-1|CAA46780.1| 1618|Homo sapiens nestin protein. 30 6.8
M75161-1|AAA58617.1| 593|Homo sapiens granulin protein. 30 6.8
AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptas... 30 6.8
>X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for
ribosomal protein L35a. ).
Length = 110
Score = 111 bits (268), Expect = 1e-24
Identities = 51/81 (62%), Positives = 59/81 (72%)
Frame = -2
Query: 291 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 112
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 111 PRGKKTKLRAIWGKVTRPHGN 49
GK K R IWGKVTR HGN
Sbjct: 62 --GKPNKTRVIWGKVTRAHGN 80
>BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 111 bits (268), Expect = 1e-24
Identities = 51/81 (62%), Positives = 59/81 (72%)
Frame = -2
Query: 291 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 112
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 111 PRGKKTKLRAIWGKVTRPHGN 49
GK K R IWGKVTR HGN
Sbjct: 62 --GKPNKTRVIWGKVTRAHGN 80
>BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein.
Length = 110
Score = 111 bits (268), Expect = 1e-24
Identities = 51/81 (62%), Positives = 59/81 (72%)
Frame = -2
Query: 291 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 112
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 111 PRGKKTKLRAIWGKVTRPHGN 49
GK K R IWGKVTR HGN
Sbjct: 62 --GKPNKTRVIWGKVTRAHGN 80
>BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 111 bits (268), Expect = 1e-24
Identities = 51/81 (62%), Positives = 59/81 (72%)
Frame = -2
Query: 291 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 112
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 111 PRGKKTKLRAIWGKVTRPHGN 49
GK K R IWGKVTR HGN
Sbjct: 62 --GKPNKTRVIWGKVTRAHGN 80
>BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 111 bits (268), Expect = 1e-24
Identities = 51/81 (62%), Positives = 59/81 (72%)
Frame = -2
Query: 291 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 112
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 111 PRGKKTKLRAIWGKVTRPHGN 49
GK K R IWGKVTR HGN
Sbjct: 62 --GKPNKTRVIWGKVTRAHGN 80
>AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting
protein 33 protein.
Length = 110
Score = 111 bits (268), Expect = 1e-24
Identities = 51/81 (62%), Positives = 59/81 (72%)
Frame = -2
Query: 291 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 112
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 111 PRGKKTKLRAIWGKVTRPHGN 49
GK K R IWGKVTR HGN
Sbjct: 62 --GKPNKTRVIWGKVTRAHGN 80
>AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a
pseudogene 3 protein.
Length = 96
Score = 95.9 bits (228), Expect = 9e-20
Identities = 45/81 (55%), Positives = 55/81 (67%)
Frame = -2
Query: 291 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 112
GRL++K+ F GYKR L+NQ E+TALLK+EG +++ FY GK C VY+AK T IPG
Sbjct: 2 GRLWSKSFFAGYKRSLQNQREHTALLKIEGGYAQDETEFYLGKRCACVYKAKSNTMIPG- 60
Query: 111 PRGKKTKLRAIWGKVTRPHGN 49
K K R IWGKVTR H N
Sbjct: 61 --SKPNKSRVIWGKVTRAHRN 79
>X94619-1|CAA64325.1| 21|Homo sapiens ribosomal protein L35a
protein.
Length = 21
Score = 38.3 bits (85), Expect = 0.020
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -2
Query: 291 GRLYAKAVFTGYKRGLRNQ 235
GRL++KA+F GYKRGLRNQ
Sbjct: 3 GRLWSKAIFAGYKRGLRNQ 21
>X65964-1|CAA46780.1| 1618|Homo sapiens nestin protein.
Length = 1618
Score = 29.9 bits (64), Expect = 6.8
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 64 GHLAPDSTQLGFF-ATGTSGNWCPLLSSVH 150
G PDST LGF+ + TS W PL S H
Sbjct: 1291 GETLPDSTPLGFYLRSPTSPRWTPLESRGH 1320
>M75161-1|AAA58617.1| 593|Homo sapiens granulin protein.
Length = 593
Score = 29.9 bits (64), Expect = 6.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 24 ELGSDTASSCHVGGSPCPR*HAAWFFC 104
++G D +SC VGG+ CP +W C
Sbjct: 441 DIGCDQHTSCPVGGTCCPSQGGSWACC 467
>AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptase
protein.
Length = 523
Score = 29.9 bits (64), Expect = 6.8
Identities = 26/89 (29%), Positives = 37/89 (41%)
Frame = -3
Query: 308 HQSPATAGCTQRPYSQDISVVYATSTRTPLSSRLKEQKTVMMQSFMLASIASMCTELRRG 129
H P + RP+ VYA + SS KEQ + SF+L+S+ + T RR
Sbjct: 304 HAGPPSTSRPPRPWDTPCPPVYAETKHFLYSSGDKEQ---LRPSFLLSSLRPILTGARR- 359
Query: 128 HQFPEVPVAKKPSCVLSGAR*PAHMATTG 42
+ + P C A PA + TG
Sbjct: 360 -LVETIFLGSSPGCQGLPAGCPACPSATG 387
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,543,981
Number of Sequences: 237096
Number of extensions: 1825817
Number of successful extensions: 13322
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13315
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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