Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_D18
         (745 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   2.3  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    23   3.0  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   4.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   5.3  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 15/69 (21%), Positives = 31/69 (44%)
 Frame = -3

Query: 311 IIEMLRRRSVLT*ESFKAKKIRR*GMLRGINYLFFVYFTIWQRSRLCVY*NSVSYPSNMV 132
           ++ ML     LT  +++A KI         + + ++ +++ Q   LC++ N +   S+ V
Sbjct: 129 LLHMLTTTITLTLLAYQATKIHAVDTYAA-SVVGYLLYSLGQVFMLCIFGNRLIEESSSV 187

Query: 131 HNEIVKSHW 105
                  HW
Sbjct: 188 MEAAYSCHW 196


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 316 IHISNGRFSLLRCDI 360
           IH+S G +S L C+I
Sbjct: 200 IHLSTGNYSRLACEI 214


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 607 FISPNGITKLHYIKSSSF 660
           F  PNG  KL  IKS S+
Sbjct: 35  FAFPNGYAKLAAIKSGSY 52


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 205 CILLFGNVLVFV 170
           C+ LFGNVLV +
Sbjct: 198 CLTLFGNVLVIL 209


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 66  IFSNRTNFVDFYSPMRLYN 122
           +F++  NF DFYS   + N
Sbjct: 790 LFASMPNFADFYSEESINN 808


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,874
Number of Sequences: 438
Number of extensions: 4729
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)