Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_D12
         (343 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X66699-1|CAA47244.1|   92|Homo sapiens ribosomal protein L37a pr...   144   5e-35
L06499-1|AAA60280.1|   92|Homo sapiens ribosomal protein L37a pr...   144   5e-35
CR542152-1|CAG46949.1|   92|Homo sapiens RPL37A protein.              144   5e-35
BC082239-1|AAH82239.1|   92|Homo sapiens ribosomal protein L37a ...   144   5e-35
BC067789-1|AAH67789.1|   92|Homo sapiens ribosomal protein L37a ...   144   5e-35
BC016748-1|AAH16748.1|   92|Homo sapiens ribosomal protein L37a ...   144   5e-35
BC014262-1|AAH14262.1|   92|Homo sapiens ribosomal protein L37a ...   144   5e-35
AC073321-2|AAY15078.1|   92|Homo sapiens unknown protein.             144   5e-35
BC000555-1|AAH00555.2|   91|Homo sapiens RPL37A protein protein.      142   2e-34
BC063476-1|AAH63476.1|   72|Homo sapiens RPL37A protein protein.      130   1e-30
AY280798-1|AAQ16302.1|  754|Homo sapiens zinc finger protein 448...    30   2.2  
AF154846-1|AAF72104.1|  754|Homo sapiens zinc finger protein pro...    30   2.2  
AF174595-1|AAF04516.1|  173|Homo sapiens F-box protein Fbx3 prot...    29   2.9  
BC025728-1|AAH25728.1|  556|Homo sapiens ZNF671 protein protein.       29   3.8  
AK027159-1|BAB15677.1|  534|Homo sapiens protein ( Homo sapiens ...    29   3.8  
L32164-1|AAA36818.1|  205|Homo sapiens Zinc finger protein.            29   5.0  
AY577304-1|AAT84393.1|  128|Homo sapiens immunoglobulin heavy ch...    28   6.6  

>X66699-1|CAA47244.1|   92|Homo sapiens ribosomal protein L37a
           protein.
          Length = 92

 Score =  144 bits (350), Expect = 5e-35
 Identities = 64/91 (70%), Positives = 76/91 (83%)
 Frame = -1

Query: 274 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRXCVGIWXCKRC 95
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 94  KRTVAGGAWXFSTTAAAAMQEXLDRRLREVK 2
            +TVAGGAW ++TT+A  ++  + RRL+E+K
Sbjct: 61  MKTVAGGAWTYNTTSAVTVKSAI-RRLKELK 90


>L06499-1|AAA60280.1|   92|Homo sapiens ribosomal protein L37a
           protein.
          Length = 92

 Score =  144 bits (350), Expect = 5e-35
 Identities = 64/91 (70%), Positives = 76/91 (83%)
 Frame = -1

Query: 274 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRXCVGIWXCKRC 95
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 94  KRTVAGGAWXFSTTAAAAMQEXLDRRLREVK 2
            +TVAGGAW ++TT+A  ++  + RRL+E+K
Sbjct: 61  MKTVAGGAWTYNTTSAVTVKSAI-RRLKELK 90


>CR542152-1|CAG46949.1|   92|Homo sapiens RPL37A protein.
          Length = 92

 Score =  144 bits (350), Expect = 5e-35
 Identities = 64/91 (70%), Positives = 76/91 (83%)
 Frame = -1

Query: 274 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRXCVGIWXCKRC 95
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 94  KRTVAGGAWXFSTTAAAAMQEXLDRRLREVK 2
            +TVAGGAW ++TT+A  ++  + RRL+E+K
Sbjct: 61  MKTVAGGAWTYNTTSAVTVKSAI-RRLKELK 90


>BC082239-1|AAH82239.1|   92|Homo sapiens ribosomal protein L37a
           protein.
          Length = 92

 Score =  144 bits (350), Expect = 5e-35
 Identities = 64/91 (70%), Positives = 76/91 (83%)
 Frame = -1

Query: 274 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRXCVGIWXCKRC 95
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 94  KRTVAGGAWXFSTTAAAAMQEXLDRRLREVK 2
            +TVAGGAW ++TT+A  ++  + RRL+E+K
Sbjct: 61  MKTVAGGAWTYNTTSAVTVKSAI-RRLKELK 90


>BC067789-1|AAH67789.1|   92|Homo sapiens ribosomal protein L37a
           protein.
          Length = 92

 Score =  144 bits (350), Expect = 5e-35
 Identities = 64/91 (70%), Positives = 76/91 (83%)
 Frame = -1

Query: 274 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRXCVGIWXCKRC 95
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 94  KRTVAGGAWXFSTTAAAAMQEXLDRRLREVK 2
            +TVAGGAW ++TT+A  ++  + RRL+E+K
Sbjct: 61  MKTVAGGAWTYNTTSAVTVKSAI-RRLKELK 90


>BC016748-1|AAH16748.1|   92|Homo sapiens ribosomal protein L37a
           protein.
          Length = 92

 Score =  144 bits (350), Expect = 5e-35
 Identities = 64/91 (70%), Positives = 76/91 (83%)
 Frame = -1

Query: 274 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRXCVGIWXCKRC 95
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 94  KRTVAGGAWXFSTTAAAAMQEXLDRRLREVK 2
            +TVAGGAW ++TT+A  ++  + RRL+E+K
Sbjct: 61  MKTVAGGAWTYNTTSAVTVKSAI-RRLKELK 90


>BC014262-1|AAH14262.1|   92|Homo sapiens ribosomal protein L37a
           protein.
          Length = 92

 Score =  144 bits (350), Expect = 5e-35
 Identities = 64/91 (70%), Positives = 76/91 (83%)
 Frame = -1

Query: 274 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRXCVGIWXCKRC 95
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 94  KRTVAGGAWXFSTTAAAAMQEXLDRRLREVK 2
            +TVAGGAW ++TT+A  ++  + RRL+E+K
Sbjct: 61  MKTVAGGAWTYNTTSAVTVKSAI-RRLKELK 90


>AC073321-2|AAY15078.1|   92|Homo sapiens unknown protein.
          Length = 92

 Score =  144 bits (350), Expect = 5e-35
 Identities = 64/91 (70%), Positives = 76/91 (83%)
 Frame = -1

Query: 274 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRXCVGIWXCKRC 95
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 94  KRTVAGGAWXFSTTAAAAMQEXLDRRLREVK 2
            +TVAGGAW ++TT+A  ++  + RRL+E+K
Sbjct: 61  MKTVAGGAWTYNTTSAVTVKSAI-RRLKELK 90


>BC000555-1|AAH00555.2|   91|Homo sapiens RPL37A protein protein.
          Length = 91

 Score =  142 bits (345), Expect = 2e-34
 Identities = 63/90 (70%), Positives = 75/90 (83%)
 Frame = -1

Query: 271 AKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRXCVGIWXCKRCK 92
           AKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C 
Sbjct: 1   AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCM 60

Query: 91  RTVAGGAWXFSTTAAAAMQEXLDRRLREVK 2
           +TVAGGAW ++TT+A  ++  + RRL+E+K
Sbjct: 61  KTVAGGAWTYNTTSAVTVKSAI-RRLKELK 89


>BC063476-1|AAH63476.1|   72|Homo sapiens RPL37A protein protein.
          Length = 72

 Score =  130 bits (314), Expect = 1e-30
 Identities = 56/71 (78%), Positives = 61/71 (85%)
 Frame = -1

Query: 274 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRXCVGIWXCKRC 95
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 94  KRTVAGGAWXF 62
            +TVAGGAW +
Sbjct: 61  MKTVAGGAWTY 71


>AY280798-1|AAQ16302.1|  754|Homo sapiens zinc finger protein 448
           protein.
          Length = 754

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 25/93 (26%), Positives = 36/93 (38%)
 Frame = -1

Query: 337 NSAGRCFFFSLSTFVSERFTKMAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTC 158
           N  G+ F +S S  V +R T   ++  K    GK    +  S + +V +   T    Y C
Sbjct: 666 NECGKVFSYSSSLMVHQR-THTGEKPYKCNDCGK---AFSDSSQLIVHQRVHTGEKPYEC 721

Query: 157 SFCGKDAMKRXCVGIWXCKRCKRTVAGGAWXFS 59
           S CGK   +R               +G AW  S
Sbjct: 722 SECGKAFSQRSTFNHHQRTHTGEKSSGLAWSVS 754


>AF154846-1|AAF72104.1|  754|Homo sapiens zinc finger protein
           protein.
          Length = 754

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 25/93 (26%), Positives = 36/93 (38%)
 Frame = -1

Query: 337 NSAGRCFFFSLSTFVSERFTKMAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTC 158
           N  G+ F +S S  V +R T   ++  K    GK    +  S + +V +   T    Y C
Sbjct: 666 NECGKVFSYSSSLMVHQR-THTGEKPYKCNDCGK---AFSDSSQLIVHQRVHTGEKPYEC 721

Query: 157 SFCGKDAMKRXCVGIWXCKRCKRTVAGGAWXFS 59
           S CGK   +R               +G AW  S
Sbjct: 722 SECGKAFSQRSTFNHHQRTHTGEKSSGLAWSVS 754


>AF174595-1|AAF04516.1|  173|Homo sapiens F-box protein Fbx3
           protein.
          Length = 173

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 275 NGQTYQKGWNYWQIWHTL 222
           NGQ     W YW+ WH L
Sbjct: 148 NGQKLVGSWGYWEAWHCL 165


>BC025728-1|AAH25728.1|  556|Homo sapiens ZNF671 protein protein.
          Length = 556

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -1

Query: 319 FFFSLSTFVSERFTKMAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAK-YTCSFCGK 143
           FF  +S  +  R     +R  + G  GK+ +    S   +++  EV   A+ Y CS CGK
Sbjct: 349 FFRQISGLIEHRRVHTGERLYQCGKCGKFFS----SKSNLIRHQEVHTGARPYVCSECGK 404

Query: 142 DAMKR 128
           +  ++
Sbjct: 405 EFSRK 409


>AK027159-1|BAB15677.1|  534|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23506 fis, clone LNG03055. ).
          Length = 534

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -1

Query: 319 FFFSLSTFVSERFTKMAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAK-YTCSFCGK 143
           FF  +S  +  R     +R  + G  GK+ +    S   +++  EV   A+ Y CS CGK
Sbjct: 349 FFRQISGLIEHRRVHTGERLYQCGKCGKFFS----SKSNLIRHQEVHTGARPYVCSECGK 404

Query: 142 DAMKR 128
           +  ++
Sbjct: 405 EFSRK 409


>L32164-1|AAA36818.1|  205|Homo sapiens Zinc finger protein.
          Length = 205

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 21/70 (30%), Positives = 31/70 (44%)
 Frame = -1

Query: 337 NSAGRCFFFSLSTFVSERFTKMAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTC 158
           N  G+ F +S S  V +R T   ++  K    GK    +  S + +V +   T    Y C
Sbjct: 104 NECGKVFSYSSSLMVHQR-THTGEKPYKCNDCGK---AFSDSSQLIVHQRVHTGEKPYEC 159

Query: 157 SFCGKDAMKR 128
           S CGK   +R
Sbjct: 160 SECGKAFSQR 169


>AY577304-1|AAT84393.1|  128|Homo sapiens immunoglobulin heavy chain
           variable region protein protein.
          Length = 128

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -3

Query: 284 VYQNGQTYQKGWNYWQIWHTLRCLST*NGQKDGSNP 177
           +Y   ++Y  GWNY+  W     ++  +G     NP
Sbjct: 93  MYYCARSYSTGWNYFDYWGQGTLVTVSSGSASAPNP 128


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,695,344
Number of Sequences: 237096
Number of extensions: 1084230
Number of successful extensions: 2732
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2732
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)