Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_D12
(343 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110490-2|CAB54440.1| 91|Caenorhabditis elegans Hypothetical ... 136 3e-33
Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.071
AF125463-6|AAD12865.1| 301|Caenorhabditis elegans Hypothetical ... 28 1.5
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 27 3.5
Z70307-7|CAA94336.2| 531|Caenorhabditis elegans Hypothetical pr... 26 6.1
Z81529-4|CAB04295.1| 272|Caenorhabditis elegans Hypothetical pr... 26 8.1
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 26 8.1
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 26 8.1
AL032639-10|CAA21634.1| 108|Caenorhabditis elegans Hypothetical... 26 8.1
>AL110490-2|CAB54440.1| 91|Caenorhabditis elegans Hypothetical
protein Y48B6A.2 protein.
Length = 91
Score = 136 bits (330), Expect = 3e-33
Identities = 60/91 (65%), Positives = 73/91 (80%)
Frame = -1
Query: 274 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRXCVGIWXCKRC 95
MAKRTKKVGI GKYGTRYGASLRKM KK+EV QH++YTCSFCGK+AMKR GIW C +C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKC 60
Query: 94 KRTVAGGAWXFSTTAAAAMQEXLDRRLREVK 2
+ VAGGA+ + T AA ++ + RRLR++K
Sbjct: 61 HKVVAGGAYVYGTVTAATVRSTI-RRLRDLK 90
>Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical
protein T13H5.4 protein.
Length = 500
Score = 32.7 bits (71), Expect = 0.071
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -3
Query: 311 FSVNFCIGEVYQNGQTYQKGWNYWQIWHTLRCLST*NGQKDGSNPTRKVYLLILW 147
+S C + Y+ + +QK +N W+ H +RCL N +N T+ L LW
Sbjct: 405 YSCEICGNQTYKGPKAFQKHFNEWRHSHGMRCLGIPN-TSHFANITKIKDALDLW 458
>AF125463-6|AAD12865.1| 301|Caenorhabditis elegans Hypothetical
protein Y49F6C.3 protein.
Length = 301
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -1
Query: 145 KDAMKRXCVGIWXCKRCKRTVAGGAWXFSTTAAAAMQEXLDRRLR 11
K A K +G++ C + + + GAW T ++ + +RLR
Sbjct: 38 KIARKNENIGVYLCCQRLKDIGEGAWSVDTEYRLTVKNSIGKRLR 82
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
F57F4.4 protein.
Length = 2090
Score = 27.1 bits (57), Expect = 3.5
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = -3
Query: 296 CIGEVYQNGQTYQKGWNYWQIWHTLRCLS-T*NGQKDGSNPTRKVYLLILW*GCYETXLC 120
C ++ NG Y WQ+ C+S + Q +G T +Y C + +C
Sbjct: 1207 CYSGLFINGTAYSSAG--WQVCQG-ECVSVSITSQFNGQAGTAALYT------CDPSRVC 1257
Query: 119 RHLXL*AMQEDCSRRSLGILHYCCRSNA 36
R+L + CS GI CC +NA
Sbjct: 1258 RNLNI---LNKCSSLENGITGCCCNTNA 1282
>Z70307-7|CAA94336.2| 531|Caenorhabditis elegans Hypothetical
protein C39E9.7 protein.
Length = 531
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = -3
Query: 326 PMLFFFSVNFCIGEVYQNGQTYQKGWNY 243
P F F C+ +Y N YQ N+
Sbjct: 62 PFFFIFLCTLCMASIYSNPTVYQSTINF 89
>Z81529-4|CAB04295.1| 272|Caenorhabditis elegans Hypothetical
protein F35E8.6 protein.
Length = 272
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 106 CKRCKRTVAGGAWXFSTTAAAA 41
CKRC T A A +TTAA A
Sbjct: 188 CKRCPATTAAPAAGVTTTAAPA 209
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 25.8 bits (54), Expect = 8.1
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = -3
Query: 296 CIGEVYQNGQTYQK-GWNYWQIWHTLRCLS-T*NGQKDGSNPTRKVYLLILW*GCYETXL 123
C ++ NG Y GW Q C+S + Q +G T +Y C + +
Sbjct: 1207 CYSGLFINGTAYSSAGWQTCQG----ECVSVSITSQFNGQAGTAALYT------CDPSRV 1256
Query: 122 CRHLXL*AMQEDCSRRSLGILHYCCRSNA 36
CR+L + CS GI CC +NA
Sbjct: 1257 CRNLKI---LNKCSTLENGITGCCCNTNA 1282
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -1
Query: 178 QHAKYTCSFCGKDAMKRXCVGIWXCKRC 95
++ KY C+ C R G+W CK C
Sbjct: 229 ENNKYECAICYTRITTRQ--GVWSCKTC 254
>AL032639-10|CAA21634.1| 108|Caenorhabditis elegans Hypothetical
protein Y38F1A.9 protein.
Length = 108
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 232 GTRYGASLRKMVKKMEVTQHAK 167
G RY + ++KMV K VT H K
Sbjct: 46 GDRYVSKIKKMVGKFTVTLHIK 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,157,918
Number of Sequences: 27780
Number of extensions: 162326
Number of successful extensions: 434
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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