Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_D07
         (582 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016080-1|AAV36965.1| 1313|Drosophila melanogaster LP01489p pro...    28   8.0  
AY375488-1|AAQ75367.1| 1313|Drosophila melanogaster loner ISO2 p...    28   8.0  
AE014296-3464|AAS65082.1| 1313|Drosophila melanogaster CG32434-P...    28   8.0  

>BT016080-1|AAV36965.1| 1313|Drosophila melanogaster LP01489p
           protein.
          Length = 1313

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 209 HSEASISLSYGYHHHIHTRQMYNMTYD 289
           HS +S S S G+HHH H  Q+++   D
Sbjct: 24  HSNSSSSRSQGHHHH-HHHQLHSSNSD 49


>AY375488-1|AAQ75367.1| 1313|Drosophila melanogaster loner ISO2
           protein.
          Length = 1313

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 209 HSEASISLSYGYHHHIHTRQMYNMTYD 289
           HS +S S S G+HHH H  Q+++   D
Sbjct: 24  HSNSSSSRSQGHHHH-HHHQLHSSNSD 49


>AE014296-3464|AAS65082.1| 1313|Drosophila melanogaster CG32434-PA,
           isoform A protein.
          Length = 1313

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 209 HSEASISLSYGYHHHIHTRQMYNMTYD 289
           HS +S S S G+HHH H  Q+++   D
Sbjct: 24  HSNSSSSRSQGHHHH-HHHQLHSSNSD 49


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,139,559
Number of Sequences: 53049
Number of extensions: 436038
Number of successful extensions: 940
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)