Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_D02
(728 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9BZS6 Cluster: SSU72 RNA polymerase II CTD phosphatase... 262 8e-69
UniRef50_Q4RXN5 Cluster: Chromosome 11 SCAF14979, whole genome s... 177 3e-63
UniRef50_Q22453 Cluster: Putative uncharacterized protein; n=2; ... 224 2e-57
UniRef50_UPI00005A3F7F Cluster: PREDICTED: similar to Ssu72 RNA ... 196 6e-49
UniRef50_O42868 Cluster: RNA polymerase II subunit A C-terminal ... 190 3e-47
UniRef50_UPI0000F31DDA Cluster: UPI0000F31DDA related cluster; n... 181 2e-44
UniRef50_P53538 Cluster: RNA polymerase II subunit A C-terminal ... 172 9e-42
UniRef50_Q2QX64 Cluster: Ssu72-like protein, expressed; n=3; Ory... 166 6e-40
UniRef50_Q558Z3 Cluster: Putative uncharacterized protein; n=1; ... 161 2e-38
UniRef50_Q8SRQ6 Cluster: SSU72 PROTEIN HOMOLOG; n=1; Encephalito... 149 9e-35
UniRef50_Q5SV18 Cluster: SSU72 RNA polymerase II CTD phosphatase... 148 1e-34
UniRef50_Q6BYP7 Cluster: RNA polymerase II subunit A C-terminal ... 143 3e-33
UniRef50_UPI00004982BE Cluster: conserved hypothetical protein; ... 138 2e-31
UniRef50_Q4WHY5 Cluster: RNA polymerase II subunit A C-terminal ... 136 7e-31
UniRef50_Q00U02 Cluster: Protein involved in transcription start... 134 3e-30
UniRef50_A2FVC5 Cluster: SSU72 protein-related protein; n=1; Tri... 112 7e-24
UniRef50_Q9H933 Cluster: CDNA FLJ13048 fis, clone NT2RP3001399, ... 104 3e-21
UniRef50_UPI0000F20D86 Cluster: PREDICTED: hypothetical protein;... 99 1e-19
UniRef50_A5GAI1 Cluster: Putative uncharacterized protein precur... 37 0.58
UniRef50_A7AZY7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_Q6F7W4 Cluster: Putative uncharacterized protein; n=2; ... 35 1.8
UniRef50_A0UUR8 Cluster: Copper amine oxidase-like precursor; n=... 35 1.8
UniRef50_UPI00006CEB56 Cluster: hypothetical protein TTHERM_0037... 35 2.3
UniRef50_Q93GC2 Cluster: GlyA; n=1; Xanthomonas campestris|Rep: ... 33 5.4
UniRef50_Q6W1J7 Cluster: Transcriptional regulatory protein; n=1... 33 5.4
UniRef50_Q6EQG2 Cluster: Probable NADH kinase; n=6; Oryza sativa... 33 5.4
UniRef50_UPI0000499114 Cluster: hypothetical protein 28.t00032; ... 33 7.2
UniRef50_A5VKD7 Cluster: KAP P-loop domain protein; n=1; Lactoba... 33 7.2
UniRef50_A0Q5G6 Cluster: Putative uncharacterized protein; n=7; ... 33 7.2
UniRef50_Q23B16 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q6C425 Cluster: Similar to DEHA0F21252g Debaryomyces ha... 33 7.2
UniRef50_A5E7R8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q8I5D0 Cluster: Putative uncharacterized protein; n=2; ... 33 9.5
>UniRef50_Q9BZS6 Cluster: SSU72 RNA polymerase II CTD phosphatase
homolog; n=70; Eukaryota|Rep: SSU72 RNA polymerase II
CTD phosphatase homolog - Homo sapiens (Human)
Length = 194
Score = 262 bits (641), Expect = 8e-69
Identities = 118/191 (61%), Positives = 148/191 (77%)
Frame = -3
Query: 606 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDE 427
S L VAVVCSSN NRSMEAH L K+GF+V+S+GTG VKLPG + D+PN Y+F YD+
Sbjct: 4 SPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQ 63
Query: 426 IYNDLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWF 247
+YNDL+ KDK YTQNG+LHMLDRN+RIKP PE+FQ C + FD+I+TCEERVYDQV+E
Sbjct: 64 MYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL 123
Query: 246 GSRRSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKC 67
SR QPVHVVN+DIQDNHEEAT+GAFLI ++ + ++D++N+IDELL EFE +
Sbjct: 124 NSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEERV 183
Query: 66 HRPILNWIMFY 34
R L+ + FY
Sbjct: 184 GRTFLHTVCFY 194
>UniRef50_Q4RXN5 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 11
SCAF14979, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 231
Score = 177 bits (430), Expect(2) = 3e-63
Identities = 77/116 (66%), Positives = 95/116 (81%)
Frame = -3
Query: 600 LYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIY 421
L VAVVCSSN NRSMEAH L K+GF+V+S+GTG VKLPG + D+PN Y+F Y ++Y
Sbjct: 6 LRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGTHVKLPGPTPDKPNVYDFKTTYVQMY 65
Query: 420 NDLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIE 253
NDL+ KDK YTQNG+LHMLDRN+RIK PE+FQ C +RFD+++TCEERVYDQV+E
Sbjct: 66 NDLVRKDKELYTQNGILHMLDRNKRIKSKPERFQNCKDRFDLVVTCEERVYDQVVE 121
Score = 88.6 bits (210), Expect(2) = 3e-63
Identities = 38/70 (54%), Positives = 53/70 (75%)
Frame = -3
Query: 243 SRRSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCH 64
SR QPVHV+N+DIQDNHEEAT+GAFLI ++ + ++D++N+I+ELL EFE K +
Sbjct: 162 SREQETLQPVHVINVDIQDNHEEATLGAFLICELCQCIEHTEDMENEIEELLQEFEEKSN 221
Query: 63 RPILNWIMFY 34
RP L+ + FY
Sbjct: 222 RPFLHTVCFY 231
>UniRef50_Q22453 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 235
Score = 224 bits (548), Expect = 2e-57
Identities = 102/193 (52%), Positives = 139/193 (72%), Gaps = 2/193 (1%)
Frame = -3
Query: 606 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFG-VLYD 430
S L AV CSSNMNRSMEAH L K+GFN++SYG+G +VK+PG + D+PNCYEFG Y+
Sbjct: 43 SKLRFAVSCSSNMNRSMEAHGILKKRGFNIESYGSGNQVKMPGPTVDKPNCYEFGPTTYE 102
Query: 429 EIYNDLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEW 250
+IY DL KD + YTQNGLLHM+DRNRRIK P++FQ FD+++ EERV+DQV+++
Sbjct: 103 DIYADLTNKDLHLYTQNGLLHMVDRNRRIKSRPQRFQAETREFDIVLCLEERVFDQVVDF 162
Query: 249 FGSRRSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEF-ES 73
PVHV+NIDI+DN EEAT GAF ++D+ K+ +S+D + DID+++ + E+
Sbjct: 163 LNRSVGKSGNPVHVINIDIEDNAEEATFGAFFVADLCEKLERSEDFEEDIDQIITDLEEN 222
Query: 72 KCHRPILNWIMFY 34
R +L+ I FY
Sbjct: 223 NPKRNLLHTICFY 235
>UniRef50_UPI00005A3F7F Cluster: PREDICTED: similar to Ssu72 RNA
polymerase II CTD phosphatase homolog; n=3;
Laurasiatheria|Rep: PREDICTED: similar to Ssu72 RNA
polymerase II CTD phosphatase homolog - Canis familiaris
Length = 246
Score = 196 bits (477), Expect = 6e-49
Identities = 93/185 (50%), Positives = 126/185 (68%)
Frame = -3
Query: 606 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDE 427
S L VAVVCSSNMNRSMEAH L K+GF V+S+G +VKLPG + P Y+F Y +
Sbjct: 29 SPLRVAVVCSSNMNRSMEAHDILQKRGFCVRSFGVARQVKLPGLIRNCPVLYDFSTTYKQ 88
Query: 426 IYNDLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWF 247
+Y DL K++ Y+ NG+L +L RN+RIKP PE+FQ C++ FDVI TCEERVYD+V++
Sbjct: 89 MYKDLWRKNRECYSSNGILQLLGRNQRIKPHPERFQECSDPFDVIFTCEERVYDRVVQDL 148
Query: 246 GSRRSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKC 67
+R QP+HVVN+DI D EEAT+GAFLI + + Q+ D+++ + +LL E K
Sbjct: 149 CAREQATFQPLHVVNVDIVDTLEEATLGAFLIYRLCQSLQQAGDMEDSLGQLLLAAEEKT 208
Query: 66 HRPIL 52
+ L
Sbjct: 209 GKSFL 213
>UniRef50_O42868 Cluster: RNA polymerase II subunit A C-terminal
domain phosphatase ssu72; n=7; Fungi/Metazoa group|Rep:
RNA polymerase II subunit A C-terminal domain
phosphatase ssu72 - Schizosaccharomyces pombe (Fission
yeast)
Length = 197
Score = 190 bits (463), Expect = 3e-47
Identities = 89/193 (46%), Positives = 130/193 (67%), Gaps = 2/193 (1%)
Frame = -3
Query: 606 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDE 427
++L ++V+C+SN NRSMEAH L G+ V S+GTG V+LPG S D+PN Y+FG YDE
Sbjct: 5 TNLQISVICASNQNRSMEAHNVLKNAGYQVDSFGTGSAVRLPGPSIDKPNIYQFGYPYDE 64
Query: 426 IYNDLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWF 247
IY +L +D YT NGLL MLDRNRRIK P ++Q + ++++ITCEER YD + E
Sbjct: 65 IYKELEAQDSRLYTANGLLKMLDRNRRIKRAPCRWQDQDSIYNIVITCEERCYDAICEDL 124
Query: 246 GSRRSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDD-LDNDIDELLHEFESK 70
R N+PV+++N+DI+DNHEEA++G I D+V K+ ++ D L+ ++ +F+S
Sbjct: 125 YRRGETLNRPVYLINVDIKDNHEEASVGGKAILDLVNKLTEAQDKLEELFPSIMADFQSN 184
Query: 69 CHR-PILNWIMFY 34
+ P+L I F+
Sbjct: 185 HPKLPVLYTIHFF 197
>UniRef50_UPI0000F31DDA Cluster: UPI0000F31DDA related cluster; n=1;
Bos taurus|Rep: UPI0000F31DDA UniRef100 entry - Bos
Taurus
Length = 218
Score = 181 bits (440), Expect = 2e-44
Identities = 80/151 (52%), Positives = 107/151 (70%)
Frame = -3
Query: 594 VAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYND 415
VAVVC SNMNRSMEAH L +KGF V+S+G G +V+LPG + + P Y F Y+E+ D
Sbjct: 11 VAVVCMSNMNRSMEAHRILRRKGFRVRSFGAGSRVRLPGRARNLPVVYNFSTTYEEMRKD 70
Query: 414 LMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRR 235
L+ KD+ Y NG+LH+L RN RIKP PE+FQ C + FDVI TC E VY++V+E R
Sbjct: 71 LVRKDRQRYNSNGILHILGRNERIKPRPERFQECRDHFDVIFTCAESVYNKVVEELWVRE 130
Query: 234 SIYNQPVHVVNIDIQDNHEEATIGAFLISDM 142
QPVHV+N+D+ DN E+AT+G+F+I ++
Sbjct: 131 QETFQPVHVINVDMADNLEDATLGSFIICEL 161
>UniRef50_P53538 Cluster: RNA polymerase II subunit A C-terminal
domain phosphatase SSU72; n=7; Saccharomycetales|Rep:
RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 206
Score = 172 bits (418), Expect = 9e-42
Identities = 88/186 (47%), Positives = 123/186 (66%), Gaps = 8/186 (4%)
Frame = -3
Query: 606 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDE 427
S+L VC+SN NRSME+H L + G+NV SYGTG V+LPG S D+PN Y FG Y++
Sbjct: 7 SNLKFCTVCASNNNRSMESHKVLQEAGYNVSSYGTGSAVRLPGLSIDKPNVYSFGTPYND 66
Query: 426 IYNDLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWF 247
IYNDL+ + + Y NGLL MLDRNRR+K PEK+Q + FD + TCEER +D V E
Sbjct: 67 IYNDLLSQSADRYKSNGLLQMLDRNRRLKKAPEKWQESTKVFDFVFTCEERCFDAVCEDL 126
Query: 246 GSRRSIYNQPVHVVNIDIQDNHEEATIG--AFL-ISDMVT---KMAQSDDL--DNDIDEL 91
+R N+ VHV+N+DI+D+ E A IG A L ++DM+ + + DD+ ++ I ++
Sbjct: 127 MNRGGKLNKIVHVINVDIKDDDENAKIGSKAILELADMLNDKIEQCEKDDIPFEDCIMDI 186
Query: 90 LHEFES 73
L E++S
Sbjct: 187 LTEWQS 192
>UniRef50_Q2QX64 Cluster: Ssu72-like protein, expressed; n=3; Oryza
sativa|Rep: Ssu72-like protein, expressed - Oryza sativa
subsp. japonica (Rice)
Length = 200
Score = 166 bits (403), Expect = 6e-40
Identities = 85/189 (44%), Positives = 121/189 (64%), Gaps = 3/189 (1%)
Frame = -3
Query: 591 AVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDL 412
A+VCSSNMNRSMEAH+ L + G +V SYGTG VKLPG S PN Y+FG Y+ IY+DL
Sbjct: 12 AMVCSSNMNRSMEAHSLLGRAGLDVASYGTGTHVKLPGPSLHEPNVYDFGTPYNVIYDDL 71
Query: 411 MEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQ--VCNERFDVIITCEERVYDQVIEWFGSR 238
KD + Y +NGLL ML RN +K P+++Q + FDVI + EERV+D +++ +R
Sbjct: 72 RRKDPDLYKRNGLLPMLKRNTSVKLAPQRWQDNAGDGLFDVIFSFEERVFDLIVDDMHNR 131
Query: 237 RSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSD-DLDNDIDELLHEFESKCHR 61
+ ++N+D++DNHEEA +GA L D+ K+ +D D + ID+L+ FE + R
Sbjct: 132 EQRMLKNALIINMDVKDNHEEAGVGAKLALDLCQKLEGADEDWEEIIDDLIITFEKQHKR 191
Query: 60 PILNWIMFY 34
+ + FY
Sbjct: 192 KLTYNMAFY 200
>UniRef50_Q558Z3 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 214
Score = 161 bits (391), Expect = 2e-38
Identities = 79/191 (41%), Positives = 122/191 (63%), Gaps = 4/191 (2%)
Frame = -3
Query: 594 VAVVCSSNMNRSMEAHAFLVKKGF-NVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYN 418
+A+VC+SN NRS+EAH VK GF N++S+GT KLPG S +PN + FG Y EIY
Sbjct: 24 IAMVCASNQNRSLEAHHLFVKNGFKNIRSFGTSAHCKLPGPSIHQPNIFSFGTPYQEIYT 83
Query: 417 DLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNE-RFDVIITCEERVYDQVIEWFGS 241
L +D+ Y +NGLL+ML+RN +K PEK+Q + +F+++ T ++RVYD VIE
Sbjct: 84 SLKNQDQELYIRNGLLNMLERNISVKLAPEKWQEEQQSKFEIVYTFDQRVYDAVIEDLLQ 143
Query: 240 R--RSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKC 67
R S QPVH++N+ ++D HEEA GA ++ + + ++ + + +D++L +F +
Sbjct: 144 RDVSSSLLQPVHIINLQVKDTHEEAVGGAQHALEITSIIEKTLNWEEKLDQILEDFYKQT 203
Query: 66 HRPILNWIMFY 34
R L+ +MFY
Sbjct: 204 SRQFLHTLMFY 214
>UniRef50_Q8SRQ6 Cluster: SSU72 PROTEIN HOMOLOG; n=1;
Encephalitozoon cuniculi|Rep: SSU72 PROTEIN HOMOLOG -
Encephalitozoon cuniculi
Length = 193
Score = 149 bits (360), Expect = 9e-35
Identities = 74/178 (41%), Positives = 110/178 (61%), Gaps = 3/178 (1%)
Frame = -3
Query: 594 VAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYND 415
+AV C+ N NRSM+ H L KKG VKS+GT +KLPG + D+PN Y FGV Y +IY+D
Sbjct: 6 LAVTCAMNQNRSMQTHDLLAKKGIPVKSFGTNPVIKLPGETMDKPNVYNFGVTYQQIYDD 65
Query: 414 LMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRR 235
L K++++Y ++G+L++L+RN +K PE F +E FD++ITCEERV+ + E++
Sbjct: 66 LCMKNEDHYRESGILYLLERNMGVKERPENFFQRSEDFDLVITCEERVFTSIFEYYADAP 125
Query: 234 SIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDD--LDNDIDELLHE-FESK 70
S Q +VN DI+D +A GA I + V + ++ L+ +D L FE K
Sbjct: 126 SC-TQCFFMVNFDIRDTPSDAIAGAQEILEFVEDVLAKEEERLEYAVDSALRRYFERK 182
>UniRef50_Q5SV18 Cluster: SSU72 RNA polymerase II CTD phosphatase
homolog; n=9; Euteleostomi|Rep: SSU72 RNA polymerase II
CTD phosphatase homolog - Homo sapiens (Human)
Length = 111
Score = 148 bits (359), Expect = 1e-34
Identities = 67/111 (60%), Positives = 85/111 (76%)
Frame = -3
Query: 366 MLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQPVHVVNIDIQD 187
MLDRN+RIKP PE+FQ C + FD+I+TCEERVYDQV+E SR QPVHVVN+DIQD
Sbjct: 1 MLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDLNSREQETCQPVHVVNVDIQD 60
Query: 186 NHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHRPILNWIMFY 34
NHEEAT+GAFLI ++ + ++D++N+IDELL EFE K R L+ + FY
Sbjct: 61 NHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 111
>UniRef50_Q6BYP7 Cluster: RNA polymerase II subunit A C-terminal
domain phosphatase SSU72; n=4; Saccharomycetales|Rep:
RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 223
Score = 143 bits (347), Expect = 3e-33
Identities = 77/187 (41%), Positives = 112/187 (59%), Gaps = 10/187 (5%)
Frame = -3
Query: 600 LYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIY 421
L + VC++N NRSME+H L G+NV+S+GTG V+LPG D+PN YEFG YD+IY
Sbjct: 6 LKICTVCAANNNRSMESHKQLKDAGYNVRSFGTGSAVRLPGPLVDKPNVYEFGTPYDDIY 65
Query: 420 NDLMEKD-KNYYTQNGLLHMLDRNRRIKPCPEKF--QVCNERFDVIITCEERVYDQVIEW 250
DL ++ Y NGL+ M++RNR IK PEK+ +FD++ITCEER +D V++
Sbjct: 66 RDLTSQEYHKMYESNGLIRMINRNRHIKRAPEKWHNNASAGKFDLVITCEERCFDLVLDD 125
Query: 249 FGSR-------RSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDEL 91
R + Q VH++NIDI+D++E A IG I +V + + + N L
Sbjct: 126 LMVRLVNKDQADTEIKQAVHIINIDIKDDYENAVIGGKGILKLVNMIHEFRN-TNKQRRL 184
Query: 90 LHEFESK 70
H+F+ +
Sbjct: 185 DHDFDDE 191
>UniRef50_UPI00004982BE Cluster: conserved hypothetical protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 201
Score = 138 bits (333), Expect = 2e-31
Identities = 72/189 (38%), Positives = 109/189 (57%), Gaps = 2/189 (1%)
Frame = -3
Query: 594 VAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYND 415
+AV+C SN NRS+ AH L + G+NV S+GTG LPGA+ R ++FG+ Y +I N
Sbjct: 15 IAVICRSNQNRSISAHCRLKQLGYNVSSFGTGVYTILPGAT--RNFGFQFGIPYKDIKNS 72
Query: 414 LMEKDKN--YYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGS 241
L + + + YY +N + MLDRN +K PEKFQ C + F++IIT + V+ V+E+F S
Sbjct: 73 LPKDEASVEYYRKNKIYQMLDRNANLKSAPEKFQDCKKEFNIIITLDYSVFMDVLEYFDS 132
Query: 240 RRSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHR 61
R S +V N+ + D + A GA +S+ + M D N+ID ++ F SK
Sbjct: 133 RESSTGSLCYVFNLTVMDQLDTAEKGAIEVSEFLKLMESDSDWMNNIDHVIKSFYSKTKI 192
Query: 60 PILNWIMFY 34
+L+ + Y
Sbjct: 193 NVLHSMQMY 201
>UniRef50_Q4WHY5 Cluster: RNA polymerase II subunit A C-terminal
domain phosphatase ssu72; n=16; Pezizomycotina|Rep: RNA
polymerase II subunit A C-terminal domain phosphatase
ssu72 - Aspergillus fumigatus (Sartorya fumigata)
Length = 287
Score = 136 bits (328), Expect = 7e-31
Identities = 77/181 (42%), Positives = 104/181 (57%), Gaps = 24/181 (13%)
Frame = -3
Query: 600 LYVAVVCSSNMNRSMEAHAFL--VKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVL-YD 430
L VC+SN NRSMEAH L F V S+GTG V+LPG S +PN Y F Y
Sbjct: 53 LKFCTVCASNQNRSMEAHLRLSTAPSPFPVISFGTGSLVRLPGPSITQPNVYNFNTTSYS 112
Query: 429 EIYNDLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQ---------------------VC 313
++Y++L+ KD+ Y NGLL+MLDRNR +K PE+FQ
Sbjct: 113 QMYDELLAKDERLYRNNGLLNMLDRNRNLKWGPERFQDWVPGMPRVDHVSKGDKGALGTE 172
Query: 312 NERFDVIITCEERVYDQVIEWFGSRRSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTK 133
DVIITCEER +D V++ ++ + N+PVHV N+DI+DNHEEA +G I ++ T+
Sbjct: 173 GGTVDVIITCEERCWDAVVDDLMNKGAALNRPVHVFNVDIRDNHEEALVGGKAILELATR 232
Query: 132 M 130
+
Sbjct: 233 L 233
>UniRef50_Q00U02 Cluster: Protein involved in transcription start
site selection; n=2; Ostreococcus|Rep: Protein involved
in transcription start site selection - Ostreococcus
tauri
Length = 205
Score = 134 bits (323), Expect = 3e-30
Identities = 77/204 (37%), Positives = 119/204 (58%), Gaps = 8/204 (3%)
Frame = -3
Query: 621 SNLKMSDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEF- 445
S+ S A VC++N NRSMEAH L++ GF+VKSYG +VKLPGAS D PN Y+F
Sbjct: 3 SSTSRSGYRYACVCAANFNRSMEAHRVLLENGFDVKSYGAASRVKLPGASRDDPNVYDFD 62
Query: 444 GVLYDEIYNDLMEKDKNY---YTQNGLLHMLDRNRRIKPCPEKFQVCNER---FDVIITC 283
G Y+EI DL + ++ Y + G+ ML RN +IK CPE+++ ER FDVI+
Sbjct: 63 GTSYEEILRDLRSQSEDLVKNYEERGMFDMLVRNAKIKRCPERWKTHRERGETFDVIVCF 122
Query: 282 EERVYDQVIEWFGSRRSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDD-LDN 106
EERV+D V+ + + + VVN+D++D++E + A + ++ + ++ +
Sbjct: 123 EERVFDLVVMDLRAAGGARDAAL-VVNLDVRDSYEGSAEAAPRALRLCERLERCEEGWEG 181
Query: 105 DIDELLHEFESKCHRPILNWIMFY 34
+ID ++ EFE + L + FY
Sbjct: 182 EIDSIVDEFEREEGLRALYCVCFY 205
>UniRef50_A2FVC5 Cluster: SSU72 protein-related protein; n=1;
Trichomonas vaginalis G3|Rep: SSU72 protein-related
protein - Trichomonas vaginalis G3
Length = 204
Score = 112 bits (270), Expect = 7e-24
Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Frame = -3
Query: 606 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDE 427
+ L A VC+SN+NRSME H L + GFNV SYGT + VK+PGAS + P ++FG Y E
Sbjct: 5 NQLAFACVCASNVNRSMEGHRVLKEAGFNVSSYGTNDYVKMPGAS-NVPLQFDFGATYKE 63
Query: 426 IYNDLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQ-----VCNERFDVIITCEERVYDQ 262
I + + ++ YY + GL+ ML + K PE++ + FDVI T + V D+
Sbjct: 64 ILSKMESENNQYYEEQGLIKMLRDDANTKEKPERWSSTFNPATLKYFDVIFTYDNNVMDR 123
Query: 261 VIEWFGSRRSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHE 82
V+ F + Q HVVNI D+ + A + + ++ + DL +++ ++ +
Sbjct: 124 VLNEFRENGNRTFQISHVVNIQTPDSRDNAILSRQYTLRLAQMLSAATDLTENLESIVDQ 183
Query: 81 FESKCHRP 58
F + P
Sbjct: 184 FNMENGNP 191
>UniRef50_Q9H933 Cluster: CDNA FLJ13048 fis, clone NT2RP3001399,
weakly similar to SSU72 PROTEIN (Ssu72 RNA polymerase II
CTD phosphatase homolog (Yeast), isoform CRA_a); n=1;
Homo sapiens|Rep: CDNA FLJ13048 fis, clone NT2RP3001399,
weakly similar to SSU72 PROTEIN (Ssu72 RNA polymerase II
CTD phosphatase homolog (Yeast), isoform CRA_a) - Homo
sapiens (Human)
Length = 153
Score = 104 bits (249), Expect = 3e-21
Identities = 46/73 (63%), Positives = 56/73 (76%)
Frame = -3
Query: 606 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDE 427
S L VAVVCSSN NRSMEAH L K+GF+V+S+GTG VKLPG + D+PN Y+F YD+
Sbjct: 4 SPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQ 63
Query: 426 IYNDLMEKDKNYY 388
+YNDL+ KDK Y
Sbjct: 64 MYNDLLRKDKELY 76
>UniRef50_UPI0000F20D86 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 228
Score = 98.7 bits (235), Expect = 1e-19
Identities = 43/68 (63%), Positives = 54/68 (79%)
Frame = -3
Query: 600 LYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIY 421
L VAVVCSSN NRSMEAH L K+GF+V+S+GTG VKLPG + D+PN Y+F Y+++Y
Sbjct: 6 LRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGTHVKLPGPAPDKPNIYDFKTTYEQMY 65
Query: 420 NDLMEKDK 397
NDL+ KDK
Sbjct: 66 NDLVRKDK 73
>UniRef50_A5GAI1 Cluster: Putative uncharacterized protein
precursor; n=1; Geobacter uraniumreducens Rf4|Rep:
Putative uncharacterized protein precursor - Geobacter
uraniumreducens Rf4
Length = 195
Score = 36.7 bits (81), Expect = 0.58
Identities = 30/98 (30%), Positives = 42/98 (42%)
Frame = -3
Query: 615 LKMSDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVL 436
L+ SD AV SS S + L+ + SYG G + L GA A P F L
Sbjct: 82 LQPSDTNGAVSSSSGPIVSGISEEVLLSSANFIGSYGNGSHIDLSGAVASMPGNDFFDGL 141
Query: 435 YDEIYNDLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKF 322
+D +++D + D +G H D N + P P F
Sbjct: 142 FDGLFDDFFDNDHGPGNNDGGGH--DNNAPV-PEPASF 176
>UniRef50_A7AZY7 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 305
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = -3
Query: 453 YEFGVLYDEIYNDLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEER 274
YEF V + Y D+++ KN+ ++ G+L++ + NR++ + F CN F ++ C
Sbjct: 118 YEFAVHETKTY-DVIQDVKNFKSEIGILYVNEFNRKV--LTKLFHECNLEFHELLKCSIY 174
Query: 273 VY 268
VY
Sbjct: 175 VY 176
>UniRef50_Q6F7W4 Cluster: Putative uncharacterized protein; n=2;
Acinetobacter|Rep: Putative uncharacterized protein -
Acinetobacter sp. (strain ADP1)
Length = 232
Score = 35.1 bits (77), Expect = 1.8
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = -3
Query: 309 ERFDVIITCEERVYDQVIEWFGSRRSIYNQPVHV-VNIDIQDNHEEATIGAFLISDMVTK 133
ERFDV+ ++ +Y + W G RSI V VN + + E +G +++
Sbjct: 146 ERFDVVKVRDDLLYLDLNRWLGKNRSIIETLAKVHVNHAVLRDAELVVMGNV---NLMAL 202
Query: 132 MAQSDDLDNDIDELLHEFESK 70
++S DLD++ +E L ES+
Sbjct: 203 FSKSSDLDDESEEKLEISESE 223
>UniRef50_A0UUR8 Cluster: Copper amine oxidase-like precursor; n=1;
Clostridium cellulolyticum H10|Rep: Copper amine
oxidase-like precursor - Clostridium cellulolyticum H10
Length = 934
Score = 35.1 bits (77), Expect = 1.8
Identities = 19/77 (24%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = -3
Query: 309 ERFDVIITCEERVYDQVIEWFGSRRSIYNQPVHVVNIDIQDNHEEA-TIGAFLISDMVTK 133
+R V + E ++VI+W S ++Y + +NI++++++E +G ++ ++ K
Sbjct: 110 QRLYVSVQVIESGLNKVIKWDSSENTLYISGQNTININVENSNESVIAVGNNILVNISNK 169
Query: 132 --MAQSDDLDNDIDELL 88
+ Q +D+ ND D++L
Sbjct: 170 YGVNQINDMINDADKIL 186
>UniRef50_UPI00006CEB56 Cluster: hypothetical protein
TTHERM_00370820; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00370820 - Tetrahymena
thermophila SB210
Length = 1792
Score = 34.7 bits (76), Expect = 2.3
Identities = 13/63 (20%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = -3
Query: 321 QVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQPVH-VVNIDIQDNHEEATIGAFLISD 145
+ C ++ +I C + Q++ +FG+++S + V+ + + I +NH+ + F++++
Sbjct: 447 KACKDKSQSLIVCSLTLLFQLLIYFGTQKSQFAPNVYRTLTLSIIENHQNVVVREFIMNN 506
Query: 144 MVT 136
+T
Sbjct: 507 FIT 509
>UniRef50_Q93GC2 Cluster: GlyA; n=1; Xanthomonas campestris|Rep:
GlyA - Xanthomonas campestris
Length = 374
Score = 33.5 bits (73), Expect = 5.4
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = -3
Query: 534 KKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNYYTQNGLLHMLDR 355
+ GF VK Y TGE ++PGA P FG E +L K+ L H
Sbjct: 157 RPGFVVKDYDTGECWRVPGACPGYPENSTFGC--GESVAELQATRKSQIDPRRLFHNQQE 214
Query: 354 NRRIKPCPEKFQVCN-ERFDVIITCEERVY 268
K C + Q+ N + D++I R Y
Sbjct: 215 CIARKSCELRCQMDNCQWMDLVIPAFTRPY 244
>UniRef50_Q6W1J7 Cluster: Transcriptional regulatory protein; n=1;
Rhizobium sp. NGR234|Rep: Transcriptional regulatory
protein - Rhizobium sp. (strain NGR234)
Length = 366
Score = 33.5 bits (73), Expect = 5.4
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = -3
Query: 618 NLKMSDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGV 439
N K+S+ +VA +CS N+ + A +K+G +Y G+K L AS DR Y G+
Sbjct: 175 NNKLSNEWVASICSDNVEGGRQIAALFLKRGARRFAYIGGKKGNL--ASEDRFAGYLSGL 232
Query: 438 LYDEI 424
+ + I
Sbjct: 233 MQNGI 237
>UniRef50_Q6EQG2 Cluster: Probable NADH kinase; n=6; Oryza
sativa|Rep: Probable NADH kinase - Oryza sativa subsp.
japonica (Rice)
Length = 325
Score = 33.5 bits (73), Expect = 5.4
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = -3
Query: 315 CNERFDVIITCEERVYDQVIEWFGSRRSIYNQPVHVVNIDIQDNHEEATIGA--FLISDM 142
C + I C+ + + I+W +R+ + P+H V++ I + + A FL S +
Sbjct: 50 CRVHKETINLCKSVLQRKSIDWISVQRNDMSNPIHDVDLVISVGGDGTLLRASHFLNSSI 109
Query: 141 VTKMAQSD-DLDNDIDELLHEFESK 70
SD +++DEL EF+++
Sbjct: 110 PVLGVNSDPTCPDEVDELTDEFDAR 134
>UniRef50_UPI0000499114 Cluster: hypothetical protein 28.t00032;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 28.t00032 - Entamoeba histolytica HM-1:IMSS
Length = 310
Score = 33.1 bits (72), Expect = 7.2
Identities = 22/107 (20%), Positives = 50/107 (46%)
Frame = -3
Query: 540 LVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNYYTQNGLLHML 361
L+ + F+ ++ K K +R N E ++ D + N++ E +NY G+ +
Sbjct: 186 LLSREFDYQTIINKLKTKKDVPQTERIN--ENDIIVDHLRNEIKEIKENYQQLEGIFNK- 242
Query: 360 DRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQ 220
+ +++K + V E DV+ + ++ DQ+++ S + I +
Sbjct: 243 -KTKQVKKLKSEKAVLQESIDVLESENRQLKDQIVQLQSSLKKIQEE 288
>UniRef50_A5VKD7 Cluster: KAP P-loop domain protein; n=1;
Lactobacillus reuteri F275|Rep: KAP P-loop domain
protein - Lactobacillus reuteri F275
Length = 672
Score = 33.1 bits (72), Expect = 7.2
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 126 QSDDLDNDIDELLHEFESKCHRPILNWI 43
+ D LDN ID + EF+ CH P+LN+I
Sbjct: 454 KEDLLDNKIDSFIDEFDKPCH-PLLNYI 480
>UniRef50_A0Q5G6 Cluster: Putative uncharacterized protein; n=7;
Gammaproteobacteria|Rep: Putative uncharacterized
protein - Francisella tularensis subsp. novicida (strain
U112)
Length = 172
Score = 33.1 bits (72), Expect = 7.2
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = -3
Query: 492 VKLPGASADRPN-CYEFGVLYDEIYNDLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQV 316
V L G A + N +EF + + EK K +N L D + C E +
Sbjct: 86 VNLGGYDASKLNELHEFALFVAADKTEAKEKAKQSLLKNSLYQHKDNLMEVDDCLELSSI 145
Query: 315 CNERFDVIITCEERVYDQVIEWFGSR 238
+ +I++ ++VYD +WFG R
Sbjct: 146 DGKYIHLILS--DKVYDLKPDWFGYR 169
>UniRef50_Q23B16 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 530
Score = 33.1 bits (72), Expect = 7.2
Identities = 10/34 (29%), Positives = 24/34 (70%)
Frame = -3
Query: 321 QVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQ 220
+V E++D+I+ ++VY +W+G++ ++YN+
Sbjct: 119 EVAEEQYDLIVHMGDQVYLDSDQWYGNKNNVYNR 152
>UniRef50_Q6C425 Cluster: Similar to DEHA0F21252g Debaryomyces
hansenii IPF 6452.1; n=1; Yarrowia lipolytica|Rep:
Similar to DEHA0F21252g Debaryomyces hansenii IPF 6452.1
- Yarrowia lipolytica (Candida lipolytica)
Length = 1318
Score = 33.1 bits (72), Expect = 7.2
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = -3
Query: 282 EERVYDQVIEWFGSRRSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDND 103
++R D +IE G+ + N + I QD+ E+ + AFL++ V Q +D D+D
Sbjct: 824 QKRAADSMIEPSGAAKRFRNSNQNNNAITAQDDGEDPILAAFLLAKQVISQTQQED-DDD 882
Query: 102 I 100
+
Sbjct: 883 V 883
>UniRef50_A5E7R8 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 479
Score = 33.1 bits (72), Expect = 7.2
Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 1/107 (0%)
Frame = -3
Query: 408 EKDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEER-VYDQVIEWFGSRRS 232
E K Y Q LH D+N EKFQ E + V+ E R +YDQ +
Sbjct: 21 ELRKAYRKQAIRLHP-DKNGNDPKAAEKFQDLGEAYGVLSNAESRKLYDQYGKEGMKNNG 79
Query: 231 IYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDEL 91
P +ID + E G+ D + K+ DDL + L
Sbjct: 80 GVGGPDGEADIDPSEFFEMVFGGSVAFRDWIGKLGMMDDLTKSAEVL 126
>UniRef50_Q8I5D0 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 3209
Score = 32.7 bits (71), Expect = 9.5
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -3
Query: 432 DEIYNDLMEKDKNYYTQ---NGLLHMLDRNRRIKPCPE 328
D +YND ++ +KNY Q N + M ++N R++ C E
Sbjct: 1927 DNMYNDTLQNNKNYIMQSRSNYNVEMFNKNNRLEDCEE 1964
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,679,000
Number of Sequences: 1657284
Number of extensions: 11856556
Number of successful extensions: 29962
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 28832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29929
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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