Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_D02
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    25   0.63 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    25   0.83 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.7  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 11/50 (22%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = -3

Query: 324 FQVCNERFDVIITCEERVYDQVIEWFGSR-RSIYNQPVHVVNIDIQDNHE 178
           F  C E F   + C++++   ++ W+      I N  ++++ + IQ   E
Sbjct: 68  FNTCGEVFSAWVRCQDQILIFLVNWYPRLIIGIMNSTLNLIFLLIQTRFE 117


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -3

Query: 594 VAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASAD 466
           + ++ SSN+++    + +L KK   V+S+G  +    P   +D
Sbjct: 451 LVIIWSSNLSKRPYIYKYLDKKNVVVQSWGASQWPDTPDLISD 493


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 324 IFLDKALFFYSCLTYVTVH 380
           IF +  L F  CL Y T+H
Sbjct: 187 IFFNMHLLFLLCLDYFTLH 205



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = +1

Query: 253 FNYLIIYSFFTSYYDIKSFITHLKFFWTRLYSSIPV 360
           + ++I+   +  YY    F  HL F     Y  +P+
Sbjct: 105 YAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPL 140


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 531  KGFNVKSYGTGE 496
            +G N KSYG GE
Sbjct: 2578 RGLNAKSYGPGE 2589


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 111 PNHRFEPFLLP 143
           P  RF PFL+P
Sbjct: 758 PGSRFHPFLIP 768


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 375  VHFECSNFCLFP 410
            + F CSN C FP
Sbjct: 1107 ITFGCSNRCFFP 1118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,897
Number of Sequences: 336
Number of extensions: 3417
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)